RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 CD151P48509 253 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 MAP2K5Q13163 448 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 ATP6AP1LQ52LC2 224 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 ZNF571Q7Z3V5 609 aaPredicted RBP19.43■□□□□ 0.7
SMPD3-201ENST00000219334 ACOX2Q99424 681 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 MARCH2Q9P0N8 246 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 TDRKHQ9Y2W6 561 aaKnown RBP19.43■□□□□ 0.7
SMPD3-201ENST00000219334 LTFP02788 710 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 THRAP10827 490 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 SKP1P63208 163 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 SEL1L3Q68CR1 1132 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 SCUBE3Q8IX30 993 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 FTHL17Q9BXU8 183 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 KLC4Q9NSK0 619 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 HPSEQ9Y251 543 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 SLCO1B7G3V0H7 640 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 ITGB6P18564 788 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 HSD17B3P37058 310 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 CENPLQ8N0S6 344 aaPredicted RBP19.42■□□□□ 0.7
SMPD3-201ENST00000219334 NOA1Q8NC60 698 aaKnown RBP19.42■□□□□ 0.7
SMPD3-201ENST00000219334 MCOLN3Q8TDD5 553 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 SH3GL1Q99961 368 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 ARMC7Q9H6L4 198 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 EFCAB1Q9HAE3 211 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 POPDC2Q9HBU9 364 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 TRPC4Q9UBN4 977 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 FRMPD4Q14CM0 1322 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 MST1RQ04912 1400 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 CLK1P49759 484 aaKnown RBP19.42■□□□□ 0.7
SMPD3-201ENST00000219334 IYDQ6PHW0 289 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 CCDC60Q8IWA6 550 aaPredicted RBP19.42■□□□□ 0.7
SMPD3-201ENST00000219334 VCPIP1Q96JH7 1222 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 ABCC13Q9NSE7 274 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 TMEM114B3SHH9 223 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 CCNT2O60583 730 aaKnown RBP19.42■□□□□ 0.7
SMPD3-201ENST00000219334 CTSEP14091 401 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 YBX3P16989 372 aaKnown RBP eCLIP19.42■□□□□ 0.7
SMPD3-201ENST00000219334 CDH8P55286 799 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 RPS7P62081 194 aaKnown RBP19.42■□□□□ 0.7
SMPD3-201ENST00000219334 SLC6A3Q01959 620 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 PLOD1Q02809 727 aaPredicted RBP19.42■□□□□ 0.7
SMPD3-201ENST00000219334 ARMC12Q5T9G4 340 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 PAFAH2Q99487 392 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 OSGEPQ9NPF4 335 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 KLHL28Q9NXS3 571 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 ZNF229Q9UJW7 825 aa19.42■□□□□ 0.7
SMPD3-201ENST00000219334 TMEM150BA6NC51 233 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 GTF2E2P29084 291 aaKnown RBP19.41■□□□□ 0.7
SMPD3-201ENST00000219334 CPA2P48052 419 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 ZNF135P52742 658 aaPredicted RBP19.41■□□□□ 0.7
SMPD3-201ENST00000219334 MRPS6P82932 125 aaKnown RBP19.41■□□□□ 0.7
SMPD3-201ENST00000219334 CHRNB3Q05901 458 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 NTRK3Q16288 839 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 TPGS1Q6ZTW0 290 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 ZFPM1Q8IX07 1006 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 ADAM32Q8TC27 787 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 SEPT3Q9UH03 358 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 SF3B1O75533 1304 aaKnown RBP eCLIP19.41■□□□□ 0.7
SMPD3-201ENST00000219334 RAD51BO15315 384 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 TOMM70O94826 608 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 PPP2R1BP30154 601 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 MLH1P40692 756 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 TRIM60Q495X7 471 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 SETMARQ53H47 684 aaPredicted RBP19.41■□□□□ 0.7
SMPD3-201ENST00000219334 PANX3Q96QZ0 392 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 MRIQ9BWK5 157 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 TRAV19A0A0A6YYK7 116 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 ALDH9A1P49189 494 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 CCL23P55773 120 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 NFYCQ13952 458 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 DOK6Q6PKX4 331 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 C16orf59Q7L2K0 433 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 APBA2Q99767 749 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 MRPS23Q9Y3D9 190 aaKnown RBP19.41■□□□□ 0.7
SMPD3-201ENST00000219334 CYP7B1O75881 506 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 RARGP13631 454 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 TFE3P19532 575 aaPredicted RBP19.41■□□□□ 0.7
SMPD3-201ENST00000219334 EIF4BP23588 611 aaKnown RBP19.41■□□□□ 0.7
SMPD3-201ENST00000219334 SERPINA4P29622 427 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 LSP1P33241 339 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 FKBP1BP68106 108 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 SLC45A4Q5BKX6 768 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 MAP4K3Q8IVH8 894 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 INO80Q9ULG1 1556 aaPredicted RBP19.41■□□□□ 0.7
SMPD3-201ENST00000219334 USP17L7P0C7H9 530 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 NR2C2P49116 596 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 GLT6D1Q7Z4J2 308 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 HTR3CQ8WXA8 447 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 OMDQ99983 421 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 ASAH2Q9NR71 780 aa19.41■□□□□ 0.7
SMPD3-201ENST00000219334 TPST1O60507 370 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 CPA3P15088 417 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 XRCC4Q13426 336 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 NR6A1Q15406 480 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 PRAMEF19Q5SWL8 479 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 CASKIN2Q8WXE0 1202 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 C2orf49Q9BVC5 232 aaPredicted RBP19.4■□□□□ 0.7
SMPD3-201ENST00000219334 YIPF3Q9GZM5 350 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 PARVBQ9HBI1 364 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 ZC4H2Q9NQZ6 224 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms