RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Ripk2P58801 539 aa12.91□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Rbm44Q3V089 1013 aa12.91□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Tmc8Q7TN58 722 aa12.91□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Mterf4Q8BVN4 346 aa12.91□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Sh3bp5lQ99LH9 392 aa12.91□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Dpy30Q99LT0 99 aa12.91□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Gcnt4E9Q649 455 aa12.91□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Vars2Q3U2A8 1060 aa12.91□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Tex24Q5DP50 351 aa12.91□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Mkrn3Q60764 544 aa12.91□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Znf512Q69Z99 562 aa12.91□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 DaglaQ6WQJ1 1044 aa12.91□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Myl12aQ6ZWQ9 172 aa12.91□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Taf5Q8C092 801 aa12.91□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Ttc39dQ0VF76 604 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 MyrfQ3UR85 1138 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Atg16l2Q6KAU8 623 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Camta2Q80Y50 1208 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 GmppbQ8BTZ7 360 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 4932414N04RikQ8CEQ9 752 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Q922M7 232 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Pin4Q9CWW6 131 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Cyb561d2Q9WUE3 222 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Pbrm1Q8BSQ9 1634 aaKnown RBP12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 SynrgQ5SV85 1306 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Vti1bO88384 232 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Gpr141Q7TQP0 305 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Epb41l5Q8BGS1 731 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Gper1Q8BMP4 375 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Hus1Q8BQY8 280 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Brat1Q8C3R1 822 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Ddx20Q9JJY4 825 aaKnown RBP12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Scgb2b7D3YYY1 112 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Vmn2r100E9QAZ9 850 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Garnl3Q3V0G7 1038 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Dsg1bQ7TSF1 1060 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Znf473Q8BI67 892 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Pex5lQ8C437 567 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 AagabQ8R2R3 316 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Hes6Q9JHE6 224 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Gpc1Q9QZF2 557 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Ppp1r36D3Z0R2 411 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Irf1P15314 329 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Ccnd1P25322 295 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Sar1aP36536 198 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Ntrk1Q3UFB7 799 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Senp5Q6NXL6 749 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Lpgat1Q91YX5 370 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 NwcQ9CQI4 244 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Lrrc17Q9CXD9 443 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Sv2aQ9JIS5 742 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Scamp3O35609 349 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Lmnb1P14733 588 aaKnown RBP12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Acad9Q8JZN5 625 aaKnown RBP12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 ClyblQ8R4N0 338 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Rtfdc1Q99K95 307 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 SncaipQ99ME3 962 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Olig1Q9JKN5 260 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Cd97Q9Z0M6 818 aa12.9□□□□□ -0.34
Ccdc88c-201ENSMUST00000068411 Gm29276A0A087WNW5 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm21117A0A087WPJ9 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm20820A0A087WPP3 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm20937A0A087WQA3 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm21258A0A087WQC7 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm28102A0A087WQL3 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm21095A0A087WR14 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm20792A0A087WRF5 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm21865A0A087WRL2 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm28576A0A087WRP6 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm28490A0A087WRT9 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm21294A0A087WS79 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm20824A0A087WS97 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm21996A0A087WSS9 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm28870A0A0A6YW38 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm29866A0A0A6YX04 222 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Catsperg2C6KI89 1145 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Vmn2r74E9PW21 853 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Pknox1O70477 436 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Marcksl1P28667 200 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Dpysl3Q62188 570 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Antxr2Q6DFX2 487 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Papd7Q6PB75 542 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Fam185aQ7TPD2 378 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gm21627Q810R0 219 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Ubash3bQ8BGG7 638 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gprc5aQ8BHL4 356 aa12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Exd2Q8VEG4 650 aaKnown RBP12.9□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Alkbh5Q3TSG4 395 aaKnown RBP12.89□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Gpr151Q7TSN6 422 aa12.89□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Trmt2aQ8BNV1 574 aaKnown RBP12.89□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Egfl7Q9QXT5 275 aa12.89□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Nrf1Q9WU00 503 aa12.89□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Ssxb9A2BI93 185 aa12.89□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Vmn2r38G3UYA8 861 aa12.89□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Vmn2r33K7N705 861 aa12.89□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Vmn2r44L7N2E1 861 aa12.89□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Ptpn11P35235 597 aa12.89□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 SntnQ8C9X1 147 aa12.89□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Aim2Q91VJ1 354 aaKnown RBP12.89□□□□□ -0.35
Ccdc88c-201ENSMUST00000068411 Pacsin3Q99JB8 424 aa12.89□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms