RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 SprtnG3X912 497 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Lrrc10bG3XA50 292 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gm5814J3QP80 125 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 H2-Eb1P04230 264 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Kif5aP33175 1027 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Stx1bP61264 288 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Dab2P98078 766 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 DselQ0VBN2 1207 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 MafaQ8CF90 359 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 BfarQ8R079 450 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Vangl2Q91ZD4 521 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Rgs10Q9CQE5 181 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Mrfap1Q9CQL7 125 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 SelenovD3YXG1 328 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Rtn2O70622 471 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 KitP05532 979 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Zfy1P10925 782 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gjb1P28230 283 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 SykP48025 629 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Scarf2P59222 833 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Slc17a7Q3TXX4 560 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Kctd19Q562E2 927 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Scd4Q6T707 353 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Neto2Q8BNJ6 525 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Sh3rf3Q8C120 878 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Vmn1r203Q8R273 311 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Mgat5Q8R4G6 740 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Sorcs3Q8VI51 1219 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Sun1Q9D666 913 aaKnown RBP8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Ptgdr2Q9Z2J6 382 aa8.72□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Iqcj-Schip1A0A088MLT8 559 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 2610008E11RikG3X964 669 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Banf1O54962 89 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Schip1P0DPB4 484 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Cxcl9P18340 126 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Ano7Q14AT5 859 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Fbxw2Q60584 422 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gpr65Q61038 337 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 GapdhsQ64467 440 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Arrdc3Q7TPQ9 414 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Iars2Q8BIJ6 1012 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Prkaa2Q8BRK8 552 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Zfp120Q8BZW4 436 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 ItchQ8C863 864 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 SmtnQ921U8 923 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Fam227bQ9D518 532 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gdap2Q9DBL2 498 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Hao1Q9WU19 370 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Tsc2Q61037 1814 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Pde9aO70628 534 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 LgmnO89017 435 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Hcls1P49710 486 aaKnown RBP8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Sox8Q04886 464 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Glt6d1Q2NKH9 311 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Ppp1r13lQ5I1X5 824 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Zfp512bQ6PHP4 879 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Alkbh8Q80Y20 664 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Frmd4aQ8BIE6 1020 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Dmtf1Q8CE22 761 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Znf426Q8R1D1 550 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Pcdhb6Q91XZ4 772 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Ap2b1Q9DBG3 937 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 NbnQ9R207 751 aa8.71□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Bmpr2O35607 1038 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Gjd2O54851 321 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Oas1aP11928 367 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Elf3Q3UPW2 391 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Papss1Q60967 624 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Gpsm1Q6IR34 673 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Stk40Q7TNL3 435 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Znf598Q80YR4 908 aaKnown RBP8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Fndc3aQ8BX90 1198 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Oas1gQ8K469 367 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Rps6kl1Q8R2S1 544 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Cadm1Q8R5M8 456 aaKnown RBP8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Krt5Q922U2 580 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Clca1Q9D7Z6 913 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Map3k6Q9WTR2 1291 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Map7d3A2AEY4 876 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Spata31E9QAF0 1014 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Gm5689F6Y2A6 97 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Scd1P13516 355 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 PenkP22005 268 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Rab21P35282 222 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Ppm1aP49443 382 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Arpp19P56212 112 aaKnown RBP8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 DazlQ64368 298 aaKnown RBP8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Arl5cQ6P068 179 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 DstykQ6XUX1 927 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Zfp398Q8BV16 643 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Ddx18Q8K363 660 aaKnown RBP8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Pth2rQ91V95 546 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 FtcdQ91XD4 541 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Ctu1Q99J10 420 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Gpatch1Q9DBM1 930 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Slc2a5Q9WV38 501 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Fam166bA2AIP0 273 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 2010300C02RikE9Q3M9 1175 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Psen1P49769 467 aa8.71□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Itga4Q00651 1039 aa8.71□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms