RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Spag6Q3V0U9 509 aa21.03■□□□□ 0.96
Trim47-201ENSMUST00000021120 Wdtc1Q80ZK9 677 aa21.03■□□□□ 0.96
Trim47-201ENSMUST00000021120 Bbox1Q924Y0 387 aa21.03■□□□□ 0.96
Trim47-201ENSMUST00000021120 GOLGA7BQ9D428 167 aa21.03■□□□□ 0.96
Trim47-201ENSMUST00000021120 Nphs1Q9QZS7 1256 aa21.03■□□□□ 0.96
Trim47-201ENSMUST00000021120 Apol11aE9PZG0 334 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Shoc2O88520 582 aaKnown RBP21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Psmc1P62192 440 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Crnkl1P63154 690 aaKnown RBP21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Smndc1Q8BGT7 238 aaKnown RBP21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Znf473Q8BI67 892 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Nipal1Q8BMW7 416 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Q8CD60 292 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Pcdhb2Q91Y00 799 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Slc13a3Q91Y63 600 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 CmasQ99KK2 432 aaKnown RBP21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Fgf22Q9ESS2 162 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Speer2E9Q9U2 264 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Morc3F7BJB9 942 aaKnown RBP21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 NumblO08919 604 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Capn6O35646 641 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Gm13103Q4VAD2 491 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Tmem65Q4VAE3 234 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Ksr1Q61097 873 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Dnajc16Q80TN4 772 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Anapc5Q8BTZ4 740 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Uba3Q8C878 462 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Etv3Q8R4Z4 513 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Pde6cQ91ZQ1 861 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Cul2Q9D4H8 745 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Gins2Q9D600 185 aa21.02■□□□□ 0.96
Trim47-201ENSMUST00000021120 Cdh16O88338 830 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Myl1P05977 188 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Pdha1P35486 390 aaKnown RBP21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 St3gal1P54751 337 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 4930502E18RikQ14BQ3 236 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Ankmy2Q3TPE9 440 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Atp4aQ64436 1033 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Vmn2r26Q6TAC4 855 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Colgalt1Q8K297 617 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tpgs1Q99MS8 303 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Spatc1lQ9D9W0 342 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Ccdc22Q9JIG7 627 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 CitP49025 2055 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Ppp1r36D3Z0R2 411 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 PrkchP23298 683 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Pax3P24610 479 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tbc1d12Q6A039 696 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Btbd10Q80X66 475 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Slitrk1Q810C1 696 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Slc9a4Q8BUE1 797 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tmem145Q8C4U2 746 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tmem132cQ8CEF9 1099 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 NamptQ99KQ4 491 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Ddx56Q9D0R4 546 aaKnown RBP21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 PapolbQ9WVP6 641 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Ror2Q9Z138 944 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 Bnip3lQ9Z2F7 218 aa21.01■□□□□ 0.95
Trim47-201ENSMUST00000021120 PigrO70570 771 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 HpdP49429 393 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 DselQ0VBN2 1207 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 KizQ3UXL4 695 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Gpsm1Q6IR34 673 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Abraxas1Q8BPZ8 407 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Csnk1g3Q8C4X2 424 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tmprss4Q8VCA5 435 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Clp1Q99LI9 425 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Chordc1Q9D1P4 331 aaKnown RBP21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Rab13Q9DD03 202 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 PrccQ9EQC8 491 aaKnown RBP21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Cetn2Q9R1K9 172 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Farp1F8VPU2 1048 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Dusp8O09112 663 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Fbxw21Q8BI38 468 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Amz1Q8BVF9 502 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tph2Q8CGV2 488 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Pcdh18Q8VHR0 1134 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 MrgpreQ91ZB7 310 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Anapc7Q9WVM3 565 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Gbp2Q9Z0E6 589 aa21■□□□□ 0.95
Trim47-201ENSMUST00000021120 Lonrf1D3YY23 762 aa20.99■□□□□ 0.95
Trim47-201ENSMUST00000021120 Myl2P51667 166 aa20.99■□□□□ 0.95
Trim47-201ENSMUST00000021120 Fam109bQ14B98 259 aa20.99■□□□□ 0.95
Trim47-201ENSMUST00000021120 Q3UE31 404 aa20.99■□□□□ 0.95
Trim47-201ENSMUST00000021120 Ccdc117Q6PB51 277 aa20.99■□□□□ 0.95
Trim47-201ENSMUST00000021120 Kdm1bQ8CIG3 826 aa20.99■□□□□ 0.95
Trim47-201ENSMUST00000021120 Socs7Q8VHQ2 579 aa20.99■□□□□ 0.95
Trim47-201ENSMUST00000021120 Arl8bQ9CQW2 186 aa20.99■□□□□ 0.95
Trim47-201ENSMUST00000021120 Cul3Q9JLV5 768 aa20.99■□□□□ 0.95
Trim47-201ENSMUST00000021120 Pcdh9F8VPK8 1237 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Zfp105G3X9I0 524 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Vmn2r19G5E8G4 854 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Fam71e2L7N480 754 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tnfaip1O70479 316 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Icam1P13597 537 aaKnown RBP20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 IhhP97812 411 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 VcpQ01853 806 aaKnown RBP20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Arhgap45Q3TBD2 1116 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Traf3Q60803 567 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Capn3Q64691 821 aa20.98■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms