RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 SCUBE2Q9NQ36 999 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 FAM32AQ9Y421 112 aaKnown RBP14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 HOXA2O43364 376 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 EGFRP00533 1210 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 ITGA9Q13797 1035 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 ATP13A4Q4VNC1 1196 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 CES3Q6UWW8 571 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 KIAA0319LQ8IZA0 1049 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 ZNF333Q96JL9 665 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 NFASCO94856 1347 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 RBP1P09455 135 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 SNHG28P0DPA3 235 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 ETS1P14921 441 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 PTPN4P29074 926 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 TNFSF9P41273 254 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 SKOR1P84550 965 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 PLIN5Q00G26 463 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 FAAP100Q0VG06 881 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 DPYSL3Q14195 570 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 PKN3Q6P5Z2 889 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 FOXR2Q6PJQ5 311 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 PRELID2Q8N945 189 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 OR5B17Q8NGF7 314 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 MRPS31Q92665 395 aaKnown RBP14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 STARD7Q9NQZ5 370 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 VPS28Q9UK41 221 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 KDM4FA0A1W2PPD8 638 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 SIGLEC16A6NMB1 481 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 CBX4O00257 560 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 RAB27AP51159 221 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 NME5P56597 212 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 PLOD1Q02809 727 aaPredicted RBP14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 BTKQ06187 659 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 BFSP2Q13515 415 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 TDRD5Q8NAT2 981 aaKnown RBP14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 ECSITQ9BQ95 431 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 TBC1D13Q9NVG8 400 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 TNFSF13BQ9Y275 285 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 MAGEB16A2A368 324 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 MAFO75444 373 aaPredicted RBP14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 GLP2RO95838 553 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 KCNA4P22459 653 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 TNFRSF8P28908 595 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 ZACNQ401N2 412 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 SPDYCQ5MJ68 293 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 FOXR1Q6PIV2 292 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 BNC2Q6ZN30 1099 aaPredicted RBP14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 RBBP8Q99708 897 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 DTNAQ9Y4J8 743 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 CRTAMO95727 393 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 AKR1A1P14550 325 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 PGAM1P18669 254 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 ATP6V1E1P36543 226 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 SCNN1BP51168 640 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 AMPD2Q01433 879 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 CYLC2Q14093 348 aaPredicted RBP14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 SEPT8Q92599 483 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 THAP11Q96EK4 314 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 DMAP1Q9NPF5 467 aaPredicted RBP14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 PCYOX1Q9UHG3 505 aa14.64□□□□□ -0.07
PCDHB16-201ENST00000609684 C16orf96A6NNT2 1141 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 EVPLLA8MZ36 301 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 TBC1D4O60343 1298 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 ACADSP16219 412 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 NCKAP1LP55160 1127 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 DMC1Q14565 340 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 FUT11Q495W5 492 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 PDPK2PQ6A1A2 396 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 KCNMB4Q86W47 210 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 FAM84AQ96KN4 292 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 CDT1Q9H211 546 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 NMRK2Q9NPI5 230 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 TEKT2Q9UIF3 430 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 ASTN2O75129 1339 aaPredicted RBP14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 HNRNPCL2B2RXH8 293 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 SHBGP04278 402 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 ADRA1DP25100 572 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 RHOAP61586 193 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 DDX39BQ13838 428 aaKnown RBP14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 CNGA2Q16280 664 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 GALNTL6Q49A17 601 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 TMEM139Q8IV31 216 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 TBC1D19Q8N5T2 526 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 TEKT4Q8WW24 435 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 PPP2R3CQ969Q6 453 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 HES6Q96HZ4 224 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 PGLYRP2Q96PD5 576 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 THUMPD3Q9BV44 507 aaKnown RBP14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 MRPL42Q9Y6G3 142 aaKnown RBP14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 YBX3P16989 372 aaKnown RBP eCLIP14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 TUBP50607 506 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 DAB2P98082 770 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 DSG1Q02413 1049 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 ANKS3Q6ZW76 656 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 GAD1Q99259 594 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 ULBP1Q9BZM6 244 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 UBXN6Q9BZV1 441 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 DCLRE1BQ9H816 532 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 GPRC5DQ9NZD1 345 aa14.63□□□□□ -0.07
PCDHB16-201ENST00000609684 PCDHB5Q9Y5E4 795 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms