RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	SCFD1	Q8WVM8	642 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	EXTL1	Q92935	676 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	TRMT2B	Q96GJ1	504 aa	Known RBP	6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	IFT74	Q96LB3	600 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	CCNL2	Q96S94	520 aa	Predicted RBP	6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	GABRG3	Q99928	467 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	CCDC113	Q9H0I3	377 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	ZCWPW1	Q9H0M4	648 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	SLC25A18	Q9H1K4	315 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	SLC6A17	Q9H1V8	727 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	VRTN	Q9H8Y1	702 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	OSGEP	Q9NPF4	335 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	GCNT4	Q9P109	453 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	USP36	Q9P275	1121 aa	Known RBP	6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	DSE	Q9UL01	958 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	PCDHB5	Q9Y5E4	795 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	SCN1A	P35498	2009 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	DOCK9	Q9BZ29	2069 aa		6.41	□□□□□ -1.38
KPNB1-209	ENST00000580158	C2orf78	A6NCI8	922 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	GFRA2	O00451	464 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	SLC37A4	O43826	429 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	TULP3	O75386	442 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	TADA3	O75528	432 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	EDN1	P05305	212 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	FAM87A	P0C7U9	286 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	MCF2	P10911	925 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	CYP3A5	P20815	502 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	CDC27	P30260	824 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	CTSK	P43235	329 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	TPMT	P51580	245 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	ZNF132	P52740	706 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	GRIN1	Q05586	938 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	LRP8	Q14114	963 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	IGFBP7	Q16270	282 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	PCSK7	Q16549	785 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	NFE2	Q16621	373 aa	Predicted RBP	6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	LY6G5C	Q5SRR4	150 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	EGFLAM	Q63HQ2	1017 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	SHISA2	Q6UWI4	295 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	DDX42	Q86XP3	938 aa	Known RBP eCLIP	6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	SLFN12	Q8IYM2	578 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	TSEN2	Q8NCE0	465 aa	Known RBP	6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	OR10T2	Q8NGX3	314 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	PIGO	Q8TEQ8	1089 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	PRCC	Q92733	491 aa	Predicted RBP	6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	SIPA1	Q96FS4	1042 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	SENP8	Q96LD8	212 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	MYRFL	Q96LU7	910 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	DEPDC7	Q96QD5	511 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	ELF4	Q99607	663 aa	Predicted RBP	6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	EIF2AK1	Q9BQI3	630 aa	Known RBP	6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	ACE2	Q9BYF1	805 aa	Predicted RBP	6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	CDT1	Q9H211	546 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	TM9SF3	Q9HD45	589 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	KCNMB3	Q9NPA1	279 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	SH3GLB2	Q9NR46	395 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	DNAJB12	Q9NXW2	375 aa	Known RBP	6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	TFIP11	Q9UBB9	837 aa	Known RBP	6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	TUBGCP4	Q9UGJ1	667 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	UBQLN1	Q9UMX0	589 aa	Known RBP	6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	PCDHB1	Q9Y5F3	818 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	RBM8A	Q9Y5S9	174 aa	Known RBP	6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	RAD54B	Q9Y620	910 aa		6.4	□□□□□ -1.38
KPNB1-209	ENST00000580158	ZFC3H1	O60293	1989 aa	Known RBP	6.4	□□□□□ -1.39
KPNB1-209	ENST00000580158	KIF26B	Q2KJY2	2108 aa		6.4	□□□□□ -1.39
KPNB1-209	ENST00000580158	NBAS	A2RRP1	2371 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	KCNJ18	B7U540	433 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	CCER2	I3L3R5	266 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	ATP9B	O43861	1147 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	SYNCRIP	O60506	623 aa	Known RBP	6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	NOL4	O94818	638 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	CYP11A1	P05108	521 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	HARS	P12081	509 aa	Known RBP	6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	GCFC2	P16383	781 aa	Known RBP	6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	ACP1	P24666	158 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	ARRB1	P49407	418 aa	Predicted RBP	6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	RCAN1	P53805	252 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	LILRA4	P59901	499 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	TSPY1	Q01534	308 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	ANO4	Q32M45	955 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	SLC10A6	Q3KNW5	377 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	GRAMD4	Q6IC98	578 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	ATCAY	Q86WG3	371 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	MIB1	Q86YT6	1006 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	FMR1NB	Q8N0W7	255 aa	Predicted RBP	6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	STKLD1	Q8NE28	680 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	SAP25	Q8TEE9	199 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	HPS3	Q969F9	1004 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	OTUB2	Q96DC9	234 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	MOCOS	Q96EN8	888 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	SGF29	Q96ES7	293 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	XPO6	Q96QU8	1125 aa	Known RBP	6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	ACOX2	Q99424	681 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	NAP1L4	Q99733	375 aa	Known RBP	6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	ACO2	Q99798	780 aa	Known RBP	6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	C2orf49	Q9BVC5	232 aa	Predicted RBP	6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	MRPL4	Q9BYD3	311 aa	Known RBP	6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	GSX2	Q9BZM3	304 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	EPN3	Q9H201	632 aa		6.39	□□□□□ -1.39
KPNB1-209	ENST00000580158	ZNF768	Q9H5H4	540 aa	Known RBP	6.39	□□□□□ -1.39

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms