RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 AOC1P19801 751 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 KCNA4P22459 653 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 CDH15P55291 814 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 RPL10AP62906 217 aaKnown RBP16.81■□□□□ 0.28
LINC00554-201ENST00000564841 XAB2Q9HCS7 855 aaKnown RBP16.81■□□□□ 0.28
LINC00554-201ENST00000564841 ANLNQ9NQW6 1124 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 SMYD2Q9NRG4 433 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 PPME1Q9Y570 386 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 CSADQ9Y600 493 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 HSP90AA5PQ58FG0 334 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 Q6ZNX1 250 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 PTAR1Q7Z6K3 402 aaPredicted RBP16.8■□□□□ 0.28
LINC00554-201ENST00000564841 TRIM50Q86XT4 487 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 IRGQQ8WZA9 623 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 ZNF668Q96K58 619 aaPredicted RBP16.8■□□□□ 0.28
LINC00554-201ENST00000564841 MCEEQ96PE7 176 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 C17orf75Q9HAS0 396 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 ARHGAP10A1A4S6 786 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 NPTX2P47972 431 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 STX3Q13277 289 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 POTEHQ6S545 545 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 RCOR2Q8IZ40 523 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 TMEM130Q8N3G9 435 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 PPP1R14CQ8TAE6 165 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 TEX13BQ9BXU2 312 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 RRN3Q9NYV6 651 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 EFR3BQ9Y2G0 817 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 CASQ2O14958 399 aaPredicted RBP16.8■□□□□ 0.28
LINC00554-201ENST00000564841 HNRNPDLO14979 420 aaKnown RBP16.8■□□□□ 0.28
LINC00554-201ENST00000564841 DCXO43602 365 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 TNFAIP8O95379 198 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 C9orf131Q5VYM1 1079 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 ATG16L1Q676U5 607 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 NDUFAF2Q8N183 169 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 GSDMBQ8TAX9 411 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 AGR3Q8TD06 166 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 ZBTB45Q96K62 511 aaPredicted RBP16.8■□□□□ 0.28
LINC00554-201ENST00000564841 FAM81BQ96LP2 452 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 PPP1R36Q96LQ0 422 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 ACSS2Q9NR19 701 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 SIRPGQ9P1W8 387 aa16.8■□□□□ 0.28
LINC00554-201ENST00000564841 KLF11O14901 512 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 CST8O60676 142 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 RFPL1O75677 317 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 FBXO21O94952 628 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 MAP3K6O95382 1288 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 PORP16435 677 aaPredicted RBP16.79■□□□□ 0.28
LINC00554-201ENST00000564841 HALP42357 657 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 GPC3P51654 580 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 RSAD2Q8WXG1 361 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 SLC17A6Q9P2U8 582 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 RSL24D1Q9UHA3 163 aaKnown RBP16.79■□□□□ 0.28
LINC00554-201ENST00000564841 WDR37Q9Y2I8 494 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 LTBP3Q9NS15 1303 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 MYH9P35579 1960 aaKnown RBP16.79■□□□□ 0.28
LINC00554-201ENST00000564841 TMEM247A6NEH6 219 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 ADAM23O75077 832 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 FAM58BPP0C7Q3 252 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 TNNI1P19237 187 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 CDKN2BP42772 138 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 PKNOX1P55347 436 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 APOFQ13790 326 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 ZBTB41Q5SVQ8 909 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 TMEM53Q6P2H8 277 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 SLC39A4Q6P5W5 647 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 TMEM270Q6UE05 265 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 CATSPERGQ6ZRH7 1159 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 LPCAT2Q7L5N7 544 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 FASTKD5Q7L8L6 764 aaKnown RBP16.79■□□□□ 0.28
LINC00554-201ENST00000564841 FBXW8Q8N3Y1 598 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 TRIML2Q8N7C3 387 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 ACTRT2Q8TDY3 377 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 VTI1AQ96AJ9 217 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 CEP170P1Q96L14 293 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 CCT7Q99832 543 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 PPCSQ9HAB8 311 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 KMT5AQ9NQR1 393 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 TBX20Q9UMR3 447 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 STK24Q9Y6E0 443 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 DNAH12Q6ZR08 3092 aa16.79■□□□□ 0.28
LINC00554-201ENST00000564841 SERPINB7O75635 380 aa16.78■□□□□ 0.28
LINC00554-201ENST00000564841 DGKIO75912 1065 aa16.78■□□□□ 0.28
LINC00554-201ENST00000564841 ITGAVP06756 1048 aa16.78■□□□□ 0.28
LINC00554-201ENST00000564841 YBX3P16989 372 aaKnown RBP eCLIP16.78■□□□□ 0.28
LINC00554-201ENST00000564841 CCND2P30279 289 aa16.78■□□□□ 0.28
LINC00554-201ENST00000564841 ARRB2P32121 409 aa16.78■□□□□ 0.28
LINC00554-201ENST00000564841 RELAQ04206 551 aa16.78■□□□□ 0.28
LINC00554-201ENST00000564841 LIN9Q5TKA1 542 aa16.78■□□□□ 0.28
LINC00554-201ENST00000564841 SLC35B2Q8TB61 432 aa16.78■□□□□ 0.28
LINC00554-201ENST00000564841 FEZF2Q8TBJ5 459 aa16.78■□□□□ 0.28
LINC00554-201ENST00000564841 NSUN6Q8TEA1 469 aaKnown RBP16.78■□□□□ 0.28
LINC00554-201ENST00000564841 MOCOSQ96EN8 888 aa16.78■□□□□ 0.28
LINC00554-201ENST00000564841 ZFRQ96KR1 1074 aaKnown RBP16.78■□□□□ 0.28
LINC00554-201ENST00000564841 TMEM206Q9H813 350 aa16.78■□□□□ 0.28
LINC00554-201ENST00000564841 EBF1Q9UH73 591 aa16.78■□□□□ 0.28
LINC00554-201ENST00000564841 SEPT9Q9UHD8 586 aaPredicted RBP16.78■□□□□ 0.28
LINC00554-201ENST00000564841 ZNF112Q9UJU3 913 aa16.78■□□□□ 0.28
LINC00554-201ENST00000564841 AGTPBP1Q9UPW5 1226 aa16.78■□□□□ 0.28
LINC00554-201ENST00000564841 DRG1Q9Y295 367 aaKnown RBP16.78■□□□□ 0.28
LINC00554-201ENST00000564841 AIM2O14862 343 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms