RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 KIAA0895Q8NCT3 520 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 FBXO36Q8NEA4 188 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 TMEM159Q96B96 161 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 FAR2Q96K12 515 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 MAGEB10Q96LZ2 347 aaPredicted RBP13.83□□□□□ -0.2
TRAF3-208ENST00000560371 SHCBP1LQ9BZQ2 653 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 TMEM51Q9NW97 253 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 SLC9A3R1O14745 358 aaPredicted RBP13.83□□□□□ -0.2
TRAF3-208ENST00000560371 BRSK2Q8IWQ3 736 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 RGL4Q8IZJ4 473 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 ERP27Q96DN0 273 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 MIEF1Q9NQG6 463 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 KDM4FA0A1W2PPD8 638 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 SLC15A5A6NIM6 579 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 CTNNB1P35222 781 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 CCL23P55773 120 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 PRKAA1Q13131 559 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 DNAJC3Q13217 504 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 ZNF268Q14587 947 aaPredicted RBP13.83□□□□□ -0.2
TRAF3-208ENST00000560371 VSIG10LQ86VR7 867 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 CCDC60Q8IWA6 550 aaPredicted RBP13.83□□□□□ -0.2
TRAF3-208ENST00000560371 LZTR1Q8N653 840 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 C3orf20Q8ND61 904 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 VCPIP1Q96JH7 1222 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 GPAMQ9HCL2 828 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 SPG21Q9NZD8 308 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 FAM198AQ9UFP1 575 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 APPL1Q9UKG1 709 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 V9GYQ6 96 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 MAGEB16A2A368 324 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 PHF20L1A8MW92 1017 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 CASP7P55210 303 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 LGI2Q8N0V4 545 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 KCNB2Q92953 911 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 MKL1Q969V6 931 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 H0YC42 278 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 IGSF6O95976 241 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 ZNF557Q8N988 423 aaPredicted RBP13.82□□□□□ -0.2
TRAF3-208ENST00000560371 SUSD6Q92537 303 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 PABPC3Q9H361 631 aaKnown RBP13.82□□□□□ -0.2
TRAF3-208ENST00000560371 IMPAD1Q9NX62 359 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 FRMPD4Q14CM0 1322 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 ACTR8Q9H981 624 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 EML1O00423 815 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 LSP1P33241 339 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 KRT20P35900 424 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 MAPK9P45984 424 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 GRAMD4Q6IC98 578 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 C11orf63Q6NUN7 778 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 OSCP1Q8WVF1 389 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 CNTFP26441 200 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 SERPINB10P48595 397 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 SPOCD1Q6ZMY3 1216 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 ZNF571Q7Z3V5 609 aaPredicted RBP13.82□□□□□ -0.2
TRAF3-208ENST00000560371 NOA1Q8NC60 698 aaKnown RBP13.82□□□□□ -0.2
TRAF3-208ENST00000560371 INPP5DQ92835 1189 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 ZIM3Q96PE6 472 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 OMDQ99983 421 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 PADI4Q9UM07 663 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 ERI2A8K979 691 aaKnown RBP13.82□□□□□ -0.2
TRAF3-208ENST00000560371 HMGCRP04035 888 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 HALP42357 657 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 ALDH6A1Q02252 535 aaKnown RBP13.82□□□□□ -0.2
TRAF3-208ENST00000560371 BCL2L1Q07817 233 aa13.82□□□□□ -0.2
TRAF3-208ENST00000560371 C16orf96A6NNT2 1141 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 B2RBV5 119 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 MYO1CO00159 1063 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 CAPN15O75808 1086 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 RBP1P09455 135 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 YBX3P16989 372 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRAF3-208ENST00000560371 MRPS6P82932 125 aaKnown RBP13.81□□□□□ -0.2
TRAF3-208ENST00000560371 E2F4Q16254 413 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 SETMARQ53H47 684 aaPredicted RBP13.81□□□□□ -0.2
TRAF3-208ENST00000560371 FBXL19Q6PCT2 694 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 B3GALNT2Q8NCR0 500 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 VMP1Q96GC9 406 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 MYCBPQ99417 103 aaPredicted RBP13.81□□□□□ -0.2
TRAF3-208ENST00000560371 TSC22D3Q99576 134 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 ELOVL6Q9H5J4 265 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 A0A0A6YYK5 440 aaPredicted RBP13.81□□□□□ -0.2
TRAF3-208ENST00000560371 FAM47E-STBD1D6RA91 191 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 RASSF9O75901 435 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 PAEPP09466 180 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 MAPK1P28482 360 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 THOP1P52888 689 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 CYP51A1Q16850 503 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 TRPM8Q7Z2W7 1104 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 ACOT9Q9Y305 439 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 TRAV19A0A0A6YYK7 116 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 PCBP1Q15365 356 aaKnown RBP eCLIP13.81□□□□□ -0.22e-7■■■■■ 44.3
TRAF3-208ENST00000560371 CNDP1Q96KN2 507 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 LTN1O94822 1766 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 GCNT1Q02742 428 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 CCNG2Q16589 344 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 TPGS1Q6ZTW0 290 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 GLT6D1Q7Z4J2 308 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 LPCAT1Q8NF37 534 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 CAMKK2Q96RR4 588 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 ABCC13Q9NSE7 274 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 NCKIPSDQ9NZQ3 722 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms