RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 TM4SF5O14894 197 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 CAVIN2O95810 425 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 FYNP06241 537 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 SETSIPP0DME0 302 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 NDUFV2P19404 249 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 SLC9A1P19634 815 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 PPP1R2P41236 205 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 CNGA2Q16280 664 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 HSF5Q4G112 596 aaPredicted RBP18.54■□□□□ 0.56
HDDC3-205ENST00000559898 STPG1Q5TH74 334 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 FOXR2Q6PJQ5 311 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 TADA2BQ86TJ2 420 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 FAM217AQ8IXS0 508 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 CHPFQ8IZ52 775 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 ARHGAP18Q8N392 663 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 C12orf50Q8NA57 414 aaPredicted RBP18.54■□□□□ 0.56
HDDC3-205ENST00000559898 IPO4Q8TEX9 1081 aaKnown RBP18.54■□□□□ 0.56
HDDC3-205ENST00000559898 MYEOVQ96EZ4 313 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 IPO9Q96P70 1041 aaKnown RBP18.54■□□□□ 0.56
HDDC3-205ENST00000559898 DNAI2Q9GZS0 605 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 MIS12Q9H081 205 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 TJP2Q9UDY2 1190 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 PCDHGA5Q9Y5G8 931 aa18.54■□□□□ 0.56
HDDC3-205ENST00000559898 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.54■□□□□ 0.56
HDDC3-205ENST00000559898 MUC22E2RYF6 1773 aaPredicted RBP18.54■□□□□ 0.56
HDDC3-205ENST00000559898 GFRA2O00451 464 aa18.53■□□□□ 0.56
HDDC3-205ENST00000559898 P4HA2O15460 535 aa18.53■□□□□ 0.56
HDDC3-205ENST00000559898 ALDH1A2O94788 518 aa18.53■□□□□ 0.56
HDDC3-205ENST00000559898 KCNA4P22459 653 aa18.53■□□□□ 0.56
HDDC3-205ENST00000559898 SLC8A3P57103 927 aa18.53■□□□□ 0.56
HDDC3-205ENST00000559898 UBE2HP62256 183 aa18.53■□□□□ 0.56
HDDC3-205ENST00000559898 PPM1JQ5JR12 505 aa18.53■□□□□ 0.56
HDDC3-205ENST00000559898 CREBRFQ8IUR6 639 aa18.53■□□□□ 0.56
HDDC3-205ENST00000559898 SIX6OS1Q8N1H7 587 aa18.53■□□□□ 0.56
HDDC3-205ENST00000559898 WFDC5Q8TCV5 224 aa18.53■□□□□ 0.56
HDDC3-205ENST00000559898 PIGKQ92643 395 aa18.53■□□□□ 0.56
HDDC3-205ENST00000559898 CDK5RAP1Q96SZ6 601 aaKnown RBP18.53■□□□□ 0.56
HDDC3-205ENST00000559898 GABRG3Q99928 467 aa18.53■□□□□ 0.56
HDDC3-205ENST00000559898 UBE2TQ9NPD8 197 aaPredicted RBP18.53■□□□□ 0.56
HDDC3-205ENST00000559898 VPS45Q9NRW7 570 aa18.53■□□□□ 0.56
HDDC3-205ENST00000559898 GON4LQ3T8J9 2241 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 LNP1A1A4G5 178 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 BECN2A8MW95 431 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 HOXD9P28356 352 aaPredicted RBP18.52■□□□□ 0.56
HDDC3-205ENST00000559898 SLC6A4P31645 630 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 IL12RB1P42701 662 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 GCNT1Q02742 428 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 RFWD3Q6PCD5 774 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 PLD4Q96BZ4 506 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 DCLK3Q9C098 648 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 CNGB3Q9NQW8 809 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 RWDD2AQ9UIY3 292 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 KIAA1257Q9ULG3 409 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 STRIP2Q9ULQ0 834 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 CNTN6Q9UQ52 1028 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 ZNF510Q9Y2H8 683 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 STON1Q9Y6Q2 735 aa18.52■□□□□ 0.56
HDDC3-205ENST00000559898 CKAP5Q14008 2032 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 IGHV1OR15-9A0A0B4J2B8 117 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 KRT5P13647 590 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 SDHBP21912 280 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 GPD2P43304 727 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 IRX4P78413 519 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 HSP90AA4PQ58FG1 418 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 NADSYN1Q6IA69 706 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 CYP2U1Q7Z449 544 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 SCUBE3Q8IX30 993 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 SCML4Q8N228 414 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 CPXM2Q8N436 756 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 ADAM32Q8TC27 787 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 KCNV2Q8TDN2 545 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 DDI1Q8WTU0 396 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 RNF139Q8WU17 664 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 EDEM2Q9BV94 578 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 ABCC13Q9NSE7 274 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 CHMP5Q9NZZ3 219 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 CYP8B1Q9UNU6 501 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 SLC27A6Q9Y2P4 619 aa18.51■□□□□ 0.55
HDDC3-205ENST00000559898 C4orf47A7E2U8 309 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 LTFP02788 710 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 PNMA6AP0CW24 399 aaPredicted RBP18.5■□□□□ 0.55
HDDC3-205ENST00000559898 ITPKAP23677 461 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 PRKCHP24723 683 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 CHKAP35790 457 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 LIMK1P53667 647 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 PITX1P78337 314 aaPredicted RBP18.5■□□□□ 0.55
HDDC3-205ENST00000559898 RNF43Q68DV7 783 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 MSANTD2Q6P1R3 559 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 TRIM65Q6PJ69 517 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 TRMT11Q7Z4G4 463 aaKnown RBP18.5■□□□□ 0.55
HDDC3-205ENST00000559898 SLC41A1Q8IVJ1 513 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 ZNF366Q8N895 744 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 TRIML1Q8N9V2 468 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 MRGPRX1Q96LB2 322 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 SIX2Q9NPC8 291 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 OLA1Q9NTK5 396 aaKnown RBP18.5■□□□□ 0.55
HDDC3-205ENST00000559898 THAP10Q9P2Z0 257 aaPredicted RBP18.5■□□□□ 0.55
HDDC3-205ENST00000559898 XPO7Q9UIA9 1087 aaKnown RBP18.5■□□□□ 0.55
HDDC3-205ENST00000559898 NAALADL1Q9UQQ1 740 aa18.5■□□□□ 0.55
HDDC3-205ENST00000559898 PI4KAP42356 2102 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms