RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 STK36Q9NRP7 1315 aa7.27□□□□□ -1.25
SPTLC2-206ENST00000557566 UTP20O75691 2785 aaKnown RBP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 EFCAB8A8MWE9 144 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 IKBKBO14920 756 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 PFKFB2O60825 505 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 PNMA6AP0CW24 399 aaPredicted RBP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 CDK4P11802 303 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 ODC1P11926 461 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 HOXB2P14652 356 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 MAOBP27338 520 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 GRIA2P42262 883 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 GRK6P43250 576 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 TNFRSF4P43489 277 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 KIR2DL1P43626 348 aaPredicted RBP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 AARSP49588 968 aaKnown RBP eCLIP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 ETF1P62495 437 aaKnown RBP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 MYO1EQ12965 1108 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 GAB4Q2WGN9 574 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 INAVAQ3KP66 663 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 ARHGAP40Q5TG30 622 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 EMC10Q5UCC4 262 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 ZNF574Q6ZN55 896 aaPredicted RBP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 DHX32Q7L7V1 743 aaKnown RBP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 NEK8Q86SG6 692 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 SFTPA1Q8IWL2 248 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 DHX40Q8IX18 779 aaKnown RBP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 BLIDQ8IZY5 108 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 ZCCHC9Q8N567 271 aaKnown RBP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 IQUBQ8NA54 791 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 SPPL2BQ8TCT7 592 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 SH3RF2Q8TEC5 729 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 PIGOQ8TEQ8 1089 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 C2orf15Q8WU43 125 aaKnown RBP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 BSNDQ8WZ55 320 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 NAP1L4Q99733 375 aaKnown RBP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 HSD17B14Q9BPX1 270 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 SLC26A6Q9BXS9 759 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 AGXT2Q9BYV1 514 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 TRIM4Q9C037 500 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 CDT1Q9H211 546 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 ZDHHC4Q9NPG8 344 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 ARHGEF4Q9NR80 690 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 UXTQ9UBK9 157 aaPredicted RBP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 TUBGCP4Q9UGJ1 667 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 DNAI1Q9UI46 699 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 MAGED2Q9UNF1 606 aaPredicted RBP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 BTBD3Q9Y2F9 522 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 FHOD1Q9Y613 1164 aa7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 USP9YO00507 2555 aaPredicted RBP7.26□□□□□ -1.25
SPTLC2-206ENST00000557566 A0A0A0MRY4 1105 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 BCAT2O15382 392 aaPredicted RBP7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 CBFA2T2O43439 604 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 CCNT1O60563 726 aaKnown RBP7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 CYP17A1P05093 508 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 CSH1P0DML2 217 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 CSH2P0DML3 217 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 MCF2P10911 925 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 HAPLN1P10915 354 aaPredicted RBP7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 TCF3P15923 654 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 HMGA1P17096 107 aaKnown RBP7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 LRPAP1P30533 357 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 KDSRQ06136 332 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 SMARCB1Q12824 385 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 SFSWAPQ12872 951 aaKnown RBP7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 TARDBPQ13148 414 aaKnown RBP eCLIP7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 TUBB2AQ13885 445 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 TRIP4Q15650 581 aaPredicted RBP7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 GALNT17Q6IS24 598 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 TMCO3Q6UWJ1 677 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 C11orf57Q6ZUT1 292 aaPredicted RBP7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 ZNF513Q8N8E2 541 aaPredicted RBP7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 NECAB1Q8N987 351 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 ZNF248Q8NDW4 579 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 DNASE2BQ8WZ79 361 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 TTC9Q92623 222 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 BRF1Q92994 677 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 PPP1R13BQ96KQ4 1090 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 IFT74Q96LB3 600 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 DRC1Q96MC2 740 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 SLC22A12Q96S37 553 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 CYP2S1Q96SQ9 504 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 TCHPQ9BT92 498 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 TUBB2BQ9BVA1 445 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 KIFC3Q9BVG8 833 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 MIR1-1HGQ9H1L0 117 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 CPNE5Q9HCH3 593 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 ZNF446Q9NWS9 450 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 KCNK4Q9NYG8 393 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 CWC15Q9P013 229 aaKnown RBP7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 GMIPQ9P107 970 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 FTSJ1Q9UET6 329 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 PCDHGA1Q9Y5H4 931 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 BSNQ9UPA5 3926 aa7.25□□□□□ -1.25
SPTLC2-206ENST00000557566 TP53BP1Q12888 1972 aaPredicted RBP7.24□□□□□ -1.25
SPTLC2-206ENST00000557566 USP27XA6NNY8 438 aa7.24□□□□□ -1.25
SPTLC2-206ENST00000557566 H3BQV1 296 aa7.24□□□□□ -1.25
SPTLC2-206ENST00000557566 K7ERI5 159 aa7.24□□□□□ -1.25
SPTLC2-206ENST00000557566 ZSCAN12O43309 604 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms