RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 SMAD6O43541 496 aaKnown RBP4.72□□□□□ -1.65
CCDC38-206ENST00000548771 CD63P08962 238 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 FAM90A13PP0C7W8 464 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 FAM90A24PP0C7X0 464 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 ATICP31939 592 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 HOXD12P35452 270 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 CPA2P48052 419 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 ZNF84P51523 738 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 FAM57BQ71RH2 274 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 C14orf80Q86SX3 495 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 FSTL5Q8N475 847 aaPredicted RBP4.72□□□□□ -1.65
CCDC38-206ENST00000548771 RNF152Q8N8N0 203 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 TSR2Q969E8 191 aaKnown RBP4.72□□□□□ -1.65
CCDC38-206ENST00000548771 GJA10Q969M2 543 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 RNF26Q9BY78 433 aaPredicted RBP4.72□□□□□ -1.65
CCDC38-206ENST00000548771 FAM234AQ9H0X4 552 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 ZBTB26Q9HCK0 441 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 PRDM11Q9NQV5 511 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 PCDHGB6Q9Y5F9 930 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 SIRT4Q9Y6E7 314 aaPredicted RBP4.72□□□□□ -1.65
CCDC38-206ENST00000548771 SPATA31A5Q5VU36 1347 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 SPATA31A7Q8IWB4 1347 aa4.72□□□□□ -1.65
CCDC38-206ENST00000548771 FOXN3O00409 490 aaPredicted RBP4.71□□□□□ -1.66
CCDC38-206ENST00000548771 EPN2O95208 641 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 IL18RAPO95256 599 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 CRYABP02511 175 aaKnown RBP4.71□□□□□ -1.66
CCDC38-206ENST00000548771 CBSLP0DN79 551 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 SCP2P22307 547 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 CBSP35520 551 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 SOX2P48431 317 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 HTR6P50406 440 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 ERV3-1Q14264 604 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 COLCA1Q6ZS62 124 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 RFX6Q8HWS3 928 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 SPATA3Q8NHX4 192 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 GDF15Q99988 308 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 HEYLQ9NQ87 328 aaPredicted RBP4.71□□□□□ -1.66
CCDC38-206ENST00000548771 ARL8BQ9NVJ2 186 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 TMEM45AQ9NWC5 275 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 TCEAL9Q9UHQ7 104 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 PCDHA12Q9UN75 941 aa4.71□□□□□ -1.66
CCDC38-206ENST00000548771 H3BNX3 289 aa4.7□□□□□ -1.66
CCDC38-206ENST00000548771 ATG13O75143 517 aa4.7□□□□□ -1.66
CCDC38-206ENST00000548771 SLC5A2P31639 672 aa4.7□□□□□ -1.66
CCDC38-206ENST00000548771 PIK3CBP42338 1070 aa4.7□□□□□ -1.66
CCDC38-206ENST00000548771 RRAGBQ5VZM2 374 aa4.7□□□□□ -1.66
CCDC38-206ENST00000548771 TTLL5Q6EMB2 1281 aa4.7□□□□□ -1.66
CCDC38-206ENST00000548771 P3H2Q8IVL5 708 aa4.7□□□□□ -1.66
CCDC38-206ENST00000548771 ATP11CQ8NB49 1132 aa4.7□□□□□ -1.66
CCDC38-206ENST00000548771 ADAMTS15Q8TE58 950 aa4.7□□□□□ -1.66
CCDC38-206ENST00000548771 SCNM1Q9BWG6 230 aa4.7□□□□□ -1.66
CCDC38-206ENST00000548771 APOL5Q9BWW9 433 aa4.7□□□□□ -1.66
CCDC38-206ENST00000548771 MOV10Q9HCE1 1003 aaKnown RBP4.7□□□□□ -1.66
CCDC38-206ENST00000548771 HEMK1Q9Y5R4 338 aaPredicted RBP4.7□□□□□ -1.66
CCDC38-206ENST00000548771 SQORQ9Y6N5 450 aa4.7□□□□□ -1.66
CCDC38-206ENST00000548771 IGLV5-39A0A0G2JS06 123 aa4.69□□□□□ -1.66
CCDC38-206ENST00000548771 LOC105371045A0A1W2PR82 267 aa4.69□□□□□ -1.66
CCDC38-206ENST00000548771 DHHO43323 396 aa4.69□□□□□ -1.66
CCDC38-206ENST00000548771 THAP12O43422 761 aa4.69□□□□□ -1.66
CCDC38-206ENST00000548771 MST1P26927 711 aa4.69□□□□□ -1.66
CCDC38-206ENST00000548771 SLC12A2P55011 1212 aa4.69□□□□□ -1.66
CCDC38-206ENST00000548771 ZNF543Q08ER8 600 aa4.69□□□□□ -1.66
CCDC38-206ENST00000548771 CNGA3Q16281 694 aa4.69□□□□□ -1.66
CCDC38-206ENST00000548771 ACSM6Q6P461 480 aa4.69□□□□□ -1.66
CCDC38-206ENST00000548771 CRTC1Q6UUV9 634 aa4.69□□□□□ -1.66
CCDC38-206ENST00000548771 CLASRPQ8N2M8 674 aaKnown RBP4.69□□□□□ -1.66
CCDC38-206ENST00000548771 ABHD5Q8WTS1 349 aa4.69□□□□□ -1.66
CCDC38-206ENST00000548771 OVCA2Q8WZ82 227 aa4.69□□□□□ -1.66
CCDC38-206ENST00000548771 CELF1Q92879 486 aaKnown RBP4.69□□□□□ -1.66
CCDC38-206ENST00000548771 IQCDQ96DY2 449 aa4.69□□□□□ -1.66
CCDC38-206ENST00000548771 ZNF845Q96IR2 970 aaPredicted RBP4.69□□□□□ -1.66
CCDC38-206ENST00000548771 MLXIPQ9HAP2 919 aa4.69□□□□□ -1.66
CCDC38-206ENST00000548771 G3BP2Q9UN86 482 aaKnown RBP4.69□□□□□ -1.66
CCDC38-206ENST00000548771 USP12O75317 370 aa4.68□□□□□ -1.66
CCDC38-206ENST00000548771 ST6GAL1P15907 406 aa4.68□□□□□ -1.66
CCDC38-206ENST00000548771 NDUFS1P28331 727 aa4.68□□□□□ -1.66
CCDC38-206ENST00000548771 IGHMBP2P38935 993 aaKnown RBP4.68□□□□□ -1.66
CCDC38-206ENST00000548771 DMWDQ09019 674 aa4.68□□□□□ -1.66
CCDC38-206ENST00000548771 UBAP2Q5T6F2 1119 aaKnown RBP4.68□□□□□ -1.66
CCDC38-206ENST00000548771 TLDC1Q6P9B6 456 aa4.68□□□□□ -1.66
CCDC38-206ENST00000548771 KYAT3Q6YP21 454 aaKnown RBP4.68□□□□□ -1.66
CCDC38-206ENST00000548771 PIGKQ92643 395 aa4.68□□□□□ -1.66
CCDC38-206ENST00000548771 AKAP1Q92667 903 aaKnown RBP eCLIP4.68□□□□□ -1.66
CCDC38-206ENST00000548771 SENP7Q9BQF6 1050 aa4.68□□□□□ -1.66
CCDC38-206ENST00000548771 PNPLA8Q9NP80 782 aa4.68□□□□□ -1.66
CCDC38-206ENST00000548771 MSRB1Q9NZV6 116 aa4.68□□□□□ -1.66
CCDC38-206ENST00000548771 MYO1AQ9UBC5 1043 aa4.68□□□□□ -1.66
CCDC38-206ENST00000548771 AGO2Q9UKV8 859 aaKnown RBP4.68□□□□□ -1.66
CCDC38-206ENST00000548771 VPS4AQ9UN37 437 aa4.68□□□□□ -1.66
CCDC38-206ENST00000548771 PCDHB2Q9Y5E7 798 aa4.68□□□□□ -1.66
CCDC38-206ENST00000548771 M0QZQ0 153 aa4.67□□□□□ -1.66
CCDC38-206ENST00000548771 SGPL1O95470 568 aa4.67□□□□□ -1.66
CCDC38-206ENST00000548771 TSHRP16473 764 aa4.67□□□□□ -1.66
CCDC38-206ENST00000548771 TFEBP19484 476 aa4.67□□□□□ -1.66
CCDC38-206ENST00000548771 FGFR2P21802 821 aa4.67□□□□□ -1.66
CCDC38-206ENST00000548771 MATN1P21941 496 aa4.67□□□□□ -1.66
CCDC38-206ENST00000548771 CASP5P51878 434 aa4.67□□□□□ -1.66
CCDC38-206ENST00000548771 MTA1Q13330 715 aa4.67□□□□□ -1.66
CCDC38-206ENST00000548771 TMEM196Q5HYL7 178 aa4.67□□□□□ -1.66
CCDC38-206ENST00000548771 MANEAQ5SRI9 462 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms