RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 C16orf46Q6P387 395 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 DHDDSQ86SQ9 333 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 PHF13Q86YI8 300 aaPredicted RBP12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 DLG3Q92796 817 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 HIST1H2AHQ96KK5 128 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 SLC4A9Q96Q91 983 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 NR1H4Q96RI1 486 aaPredicted RBP12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 HIST1H2AJQ99878 128 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 H2AFJQ9BTM1 129 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 IDI2Q9BXS1 227 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 FHDC1Q9C0D6 1143 aaPredicted RBP12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 ETNK2Q9NVF9 386 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 CROTQ9UKG9 612 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 GRIN2DO15399 1336 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 SIGLEC16A6NMB1 481 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 CYP2C9P11712 490 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 NDST1P52848 882 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 ZNF484Q5JVG2 852 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 B3GNT6Q6ZMB0 384 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 ZBTB45Q96K62 511 aaPredicted RBP12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 COPS7BQ9H9Q2 264 aaPredicted RBP12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 GPAMQ9HCL2 828 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 A8MUI8 341 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 MGRN1O60291 552 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 BANF1O75531 89 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 WDR47O94967 919 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 KCNT2Q6UVM3 1135 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 KCNMB4Q86W47 210 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 DHFR2Q86XF0 187 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 ECHDC2Q86YB7 292 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 SLC22A9Q8IVM8 553 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 SMNDC1O75940 238 aaKnown RBP eCLIP12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 HMGCRP04035 888 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 CHRM3P20309 590 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 ACO1P21399 889 aaKnown RBP12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 ETFBP38117 255 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 ALDH1A3P47895 512 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 MRPS22P82650 360 aaKnown RBP12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 MMRN1Q13201 1228 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 THEMIS2Q5TEJ8 643 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 ZDHHC17Q8IUH5 632 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 FICDQ9BVA6 458 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 CEP41Q9BYV8 373 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 ZNF556Q9HAH1 456 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 NMRK1Q9NWW6 199 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 ITGA11Q9UKX5 1188 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 RNF112Q9ULX5 631 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 VPS9D1Q9Y2B5 631 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 FAM32AQ9Y421 112 aaKnown RBP12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 SPATA31A6Q5VVP1 1343 aa12.54□□□□□ -0.4
NPC1L1-204ENST00000546276 hCG_1818297A0A087WSY0 165 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 EVPLLA8MZ36 301 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 DYNC1LI2O43237 492 aaPredicted RBP12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 HMBSP08397 361 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 MYL4P12829 197 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 BACE1P56817 501 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 TAS2R40P59535 323 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 RAD51Q06609 339 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 C16orf72Q14CZ0 275 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 RNF219Q5W0B1 726 aaPredicted RBP12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 IL31Q6EBC2 164 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 KNDC1Q76NI1 1749 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 ARCQ7LC44 396 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 FITM2Q8N6M3 262 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 TMEM161BQ8NDZ6 487 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 PCDHB18PQ96TA0 734 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 GRIP2Q9C0E4 1043 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 XPNPEP3Q9NQH7 507 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 PIH1D1Q9NWS0 290 aaKnown RBP12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 SYNPO2Q9UMS6 1093 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 ANKRD6Q9Y2G4 727 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 COMMD3-BMI1R4GMX3 469 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 A0A1W2PPM1 405 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 HACD1B0YJ81 288 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 ZSCAN9O15535 394 aaPredicted RBP12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 NOMO3P69849 1222 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 TRIM60Q495X7 471 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 ANGEL2Q5VTE6 544 aaKnown RBP12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 PTRHD1Q6GMV3 140 aaKnown RBP12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 BBS12Q6ZW61 710 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 CLVS1Q8IUQ0 354 aaPredicted RBP12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 NMRAL1Q9HBL8 299 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 GPRC5DQ9NZD1 345 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 RRN3P2A6NIE6 340 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 RNF103O00237 685 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 TPP1O14773 563 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 KRT75O95678 551 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 AMPD1P23109 780 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 RUNX1T1Q06455 604 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 CDH17Q12864 832 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 DCTN2Q13561 401 aaKnown RBP12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 FASTKQ14296 549 aaKnown RBP12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 TIGD7Q6NT04 549 aaPredicted RBP12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 ZC4H2Q9NQZ6 224 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 SMIM31A0A1B0GVY4 71 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 MRASO14807 208 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 RASSF9O75901 435 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 FBXO21O94952 628 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 CDH8P55286 799 aa12.53□□□□□ -0.4
NPC1L1-204ENST00000546276 PDK3Q15120 406 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms