RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 NPTXRO95502 500 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 TRUB2O95900 331 aaKnown RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 CALCAP01258 141 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 ZNF865P0CJ78 1059 aaPredicted RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 AKR1A1P14550 325 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 ATP2A2P16615 1042 aaKnown RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 TGM2P21980 687 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 LRPAP1P30533 357 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 SDC4P31431 198 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 HPDP32754 393 aaPredicted RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 CD68P34810 354 aaPredicted RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 TAF6P49848 677 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 ARSEP51690 589 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 ZNF135P52742 658 aaPredicted RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 AIF1P55008 147 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 ARL4CP56559 192 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 SLC6A3Q01959 620 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 OGDHQ02218 1023 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 BST2Q10589 180 aaKnown RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 SREBF2Q12772 1141 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 HYAL2Q12891 473 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 XRCC4Q13426 336 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 SNX1Q13596 522 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 AUHQ13825 339 aaKnown RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 SNX17Q15036 470 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 TAF1CQ15572 869 aaPredicted RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 KIZQ2M2Z5 673 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 P3H1Q32P28 736 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 ZC3H12AQ5D1E8 599 aaKnown RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 FBXO47Q5MNV8 452 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 GJC2Q5T442 439 aaPredicted RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 ERMARDQ5T6L9 678 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 RNASEH2BQ5TBB1 312 aaKnown RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 CYP4A22Q5TCH4 519 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 GKAP1Q5VSY0 366 aaPredicted RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 C9orf57Q5W0N0 161 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 TXNDC11Q6PKC3 985 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 ARHGEF18Q6ZSZ5 1173 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 BZW1Q7L1Q6 419 aaKnown RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 SLC26A9Q7LBE3 791 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 SRLQ86TD4 932 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 NLRP14Q86W24 1093 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 CPNE8Q86YQ8 564 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 RASAL3Q86YV0 1011 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 TOP6BLQ8N6T0 577 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 ANKRD52Q8NB46 1076 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 KCTD6Q8NC69 237 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 NPLOC4Q8TAT6 608 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 MYCBPAPQ8TBZ2 947 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 SLC35F5Q8WV83 523 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 ATG4AQ8WYN0 398 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 KAT2BQ92831 832 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 APBB2Q92870 758 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 RTP4Q96DX8 246 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 XPO6Q96QU8 1125 aaKnown RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 RBM15Q96T37 977 aaKnown RBP eCLIP5.8□□□□□ -1.48
PCF11-205ENST00000530906 PTPN18Q99952 460 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 ZNF670Q9BS34 389 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 HERPUD2Q9BSE4 406 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 HEMGNQ9BXL5 484 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 MAK16Q9BXY0 300 aaKnown RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 SPC25Q9HBM1 224 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 ZFYVE28Q9HCC9 887 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 SSU72Q9NP77 194 aaKnown RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 METTL5Q9NRN9 209 aaKnown RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 SETD4Q9NVD3 440 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 GTF2IRD1Q9UHL9 959 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 SLC24A2Q9UI40 661 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 TSPAN16Q9UKR8 245 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 DNPEPQ9ULA0 475 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 USP18Q9UMW8 372 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 R3HDM2Q9Y2K5 976 aaKnown RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 RRP15Q9Y3B9 282 aaKnown RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 SF3B1O75533 1304 aaKnown RBP eCLIP5.79□□□□□ -1.48
PCF11-205ENST00000530906 CASP8AP2Q9UKL3 1982 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 SMIM28A0A1B0GU29 152 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 KPNA7A9QM74 516 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 E7ESA3 106 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 SGK1O00141 431 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 TULP2O00295 520 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 CST8O60676 142 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 HUS1O60921 280 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 RECQL4O94761 1208 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 FBXO21O94952 628 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 TGFB1P01137 390 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 GSTA2P09210 222 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 PDGFRAP16234 1089 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 FGFR4P22455 802 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 WARSP23381 471 aaKnown RBP5.79□□□□□ -1.48
PCF11-205ENST00000530906 MIPP30301 263 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 GJC1P36383 396 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 MAGEA4P43358 317 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 MAGEA6P43360 314 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 RAP1GAPP47736 663 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 CCT5P48643 541 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 NR2C2P49116 596 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 RAB27AP51159 221 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 CDH8P55286 799 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 HUNKP57058 714 aa5.79□□□□□ -1.48
PCF11-205ENST00000530906 CORO7P57737 925 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms