RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 TP63Q9H3D4 680 aaPredicted RBP5.9□□□□□ -1.46
SKP1-208ENST00000521216 CCDC134Q9H6E4 229 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 FZD4Q9ULV1 537 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 TCRBV5S1A1TA0A578 114 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 MANSC4A6NHS7 340 aaPredicted RBP5.89□□□□□ -1.47
SKP1-208ENST00000521216 HMX3A6NHT5 357 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 POC1B-GALNT4F8VUJ3 575 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 DHHO43323 396 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 PPP6R2O75170 966 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 SLC3A2P08195 630 aaKnown RBP5.89□□□□□ -1.47
SKP1-208ENST00000521216 HALP42357 657 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 POLE2P56282 527 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 RNASELQ05823 741 aaKnown RBP5.89□□□□□ -1.47
SKP1-208ENST00000521216 CBFBQ13951 182 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 CERKLQ49MI3 558 aaPredicted RBP5.89□□□□□ -1.47
SKP1-208ENST00000521216 LIN54Q6MZP7 749 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 GALNT4Q8N4A0 578 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 ANKRD42Q8N9B4 389 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 TRIM63Q969Q1 353 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 MYLK2Q9H1R3 596 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 SLITRK6Q9H5Y7 841 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 MLXIPQ9HAP2 919 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 RIPOR2Q9Y4F9 1068 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 HEMK1Q9Y5R4 338 aaPredicted RBP5.89□□□□□ -1.47
SKP1-208ENST00000521216 AOX1Q06278 1338 aa5.89□□□□□ -1.47
SKP1-208ENST00000521216 M0QZQ0 153 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 PROP1O75360 226 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 CYP2D6P10635 497 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 PEPDP12955 493 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 THBS4P35443 961 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 WDR5P61964 334 aaKnown RBP5.88□□□□□ -1.47
SKP1-208ENST00000521216 AP2B1P63010 937 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 PRKG1Q13976 671 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 RPS6KA2Q15349 733 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 SMN1Q16637 294 aaKnown RBP5.88□□□□□ -1.47
SKP1-208ENST00000521216 ACSM6Q6P461 480 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 VSTM1Q6UX27 236 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 ZNF788Q6ZQV5 615 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 TRABD2AQ86V40 505 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 DNAJC10Q8IXB1 793 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 HMGB4Q8WW32 186 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 EID2BQ96D98 161 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 REXO5Q96IC2 774 aaKnown RBP5.88□□□□□ -1.47
SKP1-208ENST00000521216 RITA1Q96K30 269 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 ASB2Q96Q27 587 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 CRAMP1Q96RY5 1269 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 ABHD10Q9NUJ1 306 aa5.88□□□□□ -1.47
SKP1-208ENST00000521216 BTBD19C9JJ37 291 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 M0QYT0 321 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 MBPP02686 304 aaPredicted RBP5.87□□□□□ -1.47
SKP1-208ENST00000521216 GRK6P43250 576 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 VPS41P49754 854 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 LARS2Q15031 903 aaKnown RBP5.87□□□□□ -1.47
SKP1-208ENST00000521216 CNGA3Q16281 694 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 PROSER3Q2NL68 480 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 C4orf46Q504U0 113 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 TMEM63BQ5T3F8 832 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 JMJD6Q6NYC1 403 aaPredicted RBP5.87□□□□□ -1.47
SKP1-208ENST00000521216 C16orf89Q6UX73 402 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 RANBP10Q6VN20 620 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 RRAGAQ7L523 313 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 SLC44A2Q8IWA5 706 aaPredicted RBP5.87□□□□□ -1.47
SKP1-208ENST00000521216 LINC01465Q8N7H1 131 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 OR52L2PQ8NGH6 319 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 SCAMP5Q8TAC9 235 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 C3orf49Q96BT1 292 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 FAR2Q96K12 515 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 HERPUD2Q9BSE4 406 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 PABPC3Q9H361 631 aaKnown RBP5.87□□□□□ -1.47
SKP1-208ENST00000521216 ELAC1Q9H777 363 aaKnown RBP5.87□□□□□ -1.47
SKP1-208ENST00000521216 RAB21Q9UL25 225 aa5.87□□□□□ -1.47
SKP1-208ENST00000521216 UBE2J1Q9Y385 318 aaPredicted RBP5.87□□□□□ -1.47
SKP1-208ENST00000521216 ARHGEF17Q96PE2 2063 aaPredicted RBP5.87□□□□□ -1.47
SKP1-208ENST00000521216 TTC34A8MYJ7 566 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 TISP43B9A030 160 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 PRRT4C9JH25 899 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 TMEM232C9JQI7 657 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 IPO5O00410 1097 aaKnown RBP5.86□□□□□ -1.47
SKP1-208ENST00000521216 PIP5K1CO60331 668 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 PPFIA2O75334 1257 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 MATN1P21941 496 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 DUSP1P28562 367 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 AGTR2P50052 363 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 TUBA4AP68366 448 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 TFF2Q03403 129 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 SF3A3Q12874 501 aaKnown RBP eCLIP5.86□□□□□ -1.47
SKP1-208ENST00000521216 SLC14A1Q13336 389 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 DHX8Q14562 1220 aaKnown RBP5.86□□□□□ -1.47
SKP1-208ENST00000521216 KPNB1Q14974 876 aaKnown RBP5.86□□□□□ -1.47
SKP1-208ENST00000521216 POSTNQ15063 836 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 PFKFB3Q16875 520 aaPredicted RBP5.86□□□□□ -1.47
SKP1-208ENST00000521216 GORABQ5T7V8 394 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 RAB11FIP2Q7L804 512 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 EXOC8Q8IYI6 725 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 SPATA5Q8NB90 893 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 HASPINQ8TF76 798 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 TRAPPC12Q8WVT3 735 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 NPIPB3Q92617 1050 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 AKAP1Q92667 903 aaKnown RBP eCLIP5.86□□□□□ -1.47
SKP1-208ENST00000521216 TRAPPC9Q96Q05 1148 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms