RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 SCAF8Q9UPN6 1271 aaKnown RBP4.25□□□□□ -1.73
VPS13B-207ENST00000518569 UBE2J1Q9Y385 318 aaPredicted RBP4.25□□□□□ -1.73
VPS13B-207ENST00000518569 EFCAB8A8MWE9 144 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 FCHO1O14526 889 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 PRAMEF2O60811 474 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 C1RP00736 705 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 JAK3P52333 1124 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 TFF2Q03403 129 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 CBFBQ13951 182 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 P3H1Q32P28 736 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 VSTM1Q6UX27 236 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 SERPINA13PQ6UXR4 307 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 DCDC5Q6ZRR9 648 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 KRT27Q7Z3Y8 459 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 SLC44A2Q8IWA5 706 aaPredicted RBP4.24□□□□□ -1.73
VPS13B-207ENST00000518569 SPATA5Q8NB90 893 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 MAFAQ8NHW3 353 aaPredicted RBP4.24□□□□□ -1.73
VPS13B-207ENST00000518569 OTUD7AQ8TE49 926 aaPredicted RBP4.24□□□□□ -1.73
VPS13B-207ENST00000518569 SLC22A17Q8WUG5 538 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 PRR11Q96HE9 360 aaPredicted RBP4.24□□□□□ -1.73
VPS13B-207ENST00000518569 HIC2Q96JB3 615 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 TMEM120AQ9BXJ8 343 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 MAFFQ9ULX9 164 aa4.24□□□□□ -1.73
VPS13B-207ENST00000518569 SPATA31A6Q5VVP1 1343 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 CCDC187A0A096LP49 1063 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 LOC105369274A0A096LPK9 316 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 LOC102723532A0A0G2JNH3 316 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 FAM90A18PA6NE21 464 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 FAM90A16PA6NEW6 464 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 LINC01548A6NM66 108 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 FAM90A9PA6NNJ1 464 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 FAM90A5PA8MXJ8 464 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 TTC34A8MYJ7 566 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 CLIC1O00299 241 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 TRIM38O00635 465 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 GCATO75600 419 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 ACTL6BO94805 426 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 LARGE1O95461 756 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 CER1O95813 267 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 PRKCGP05129 697 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 FAM90A15PP0C7V4 464 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 FAM90A14PP0C7W9 464 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 VEGFAP15692 232 aaPredicted RBP4.23□□□□□ -1.73
VPS13B-207ENST00000518569 KLRK1P26718 216 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 GALNSP34059 522 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 NANOS3P60323 173 aaKnown RBP4.23□□□□□ -1.73
VPS13B-207ENST00000518569 AP2B1P63010 937 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 TUBA4AP68366 448 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 MFSD13AQ14CX5 517 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 CERKLQ49MI3 558 aaPredicted RBP4.23□□□□□ -1.73
VPS13B-207ENST00000518569 PRAMEF17Q5VTA0 474 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 NFRKBQ6P4R8 1299 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 TMEM65Q6PI78 240 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 KLHL17Q6TDP4 642 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 ZNF788Q6ZQV5 615 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 RAB11FIP2Q7L804 512 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 CCDC117Q8IWD4 279 aaPredicted RBP4.23□□□□□ -1.73
VPS13B-207ENST00000518569 DNAJC10Q8IXB1 793 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 OR4N4Q8N0Y3 316 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 MYCT1Q8N699 235 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 OR1N1Q8NGS0 311 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 CCT6BQ92526 530 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 FAR2Q96K12 515 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 RITA1Q96K30 269 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 HS6ST2Q96MM7 605 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 ASB2Q96Q27 587 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 PAGR1Q9BTK6 254 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 ISCA1Q9BUE6 129 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 DDX23Q9BUQ8 820 aaKnown RBP4.23□□□□□ -1.73
VPS13B-207ENST00000518569 ADGRE3Q9BY15 652 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 MYLK2Q9H1R3 596 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 PABPC3Q9H361 631 aaKnown RBP4.23□□□□□ -1.73
VPS13B-207ENST00000518569 PRDM8Q9NQV8 689 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 ABHD10Q9NUJ1 306 aa4.23□□□□□ -1.73
VPS13B-207ENST00000518569 M0QZQ0 153 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 FYB1O15117 783 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 RPP40O75818 363 aaKnown RBP4.22□□□□□ -1.73
VPS13B-207ENST00000518569 ALADP13716 330 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 HALP42357 657 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 PROK1P58294 105 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 RAE1P78406 368 aaKnown RBP4.22□□□□□ -1.73
VPS13B-207ENST00000518569 SLC10A2Q12908 348 aaPredicted RBP4.22□□□□□ -1.73
VPS13B-207ENST00000518569 DHX8Q14562 1220 aaKnown RBP4.22□□□□□ -1.73
VPS13B-207ENST00000518569 KCNB1Q14721 858 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 AAK1Q2M2I8 961 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 LIN54Q6MZP7 749 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 CHSY1Q86X52 802 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 GALNT15Q8N3T1 639 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 ZNF398Q8TD17 642 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 NPIPB3Q92617 1050 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 SDCCAG3Q96C92 435 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 REXO5Q96IC2 774 aaKnown RBP4.22□□□□□ -1.73
VPS13B-207ENST00000518569 CRAMP1Q96RY5 1269 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 CDCP1Q9H5V8 836 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 GRHPRQ9UBQ7 328 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 CNTN6Q9UQ52 1028 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 ZBTB1Q9Y2K1 713 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 RIPOR2Q9Y4F9 1068 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 PCDHB2Q9Y5E7 798 aa4.22□□□□□ -1.73
VPS13B-207ENST00000518569 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms