RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SNX29Q8TEQ0 813 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 JADE3Q92613 823 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 PHKBQ93100 1093 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 SMARCE1Q969G3 411 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 MUL1Q969V5 352 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 RAB7BQ96AH8 199 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 ART5Q96L15 291 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 CNOT6LQ96LI5 555 aaKnown RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 SLC2A13Q96QE2 648 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 EIF3CQ99613 913 aaKnown RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 TSG101Q99816 390 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 TBCDQ9BTW9 1192 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 OXCT2Q9BYC2 517 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 LY9Q9HBG7 655 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 EVA1BQ9NVM1 165 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 TOR4AQ9NXH8 423 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 EHD3Q9NZN3 535 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 FEM1BQ9UK73 627 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 FBXL21Q9UKT6 434 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 KLHL20Q9Y2M5 609 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 PCDHB14Q9Y5E9 798 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 TAF6LQ9Y6J9 622 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 HTTP42858 3142 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 GOLGA8MH3BSY2 632 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 GTPBP1O00178 669 aaKnown RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZNF213O14771 459 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 BUB1O43683 1085 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 CIDEAO60543 219 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 OR5F1O95221 314 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 ALDH1A1P00352 501 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 RB1P06400 928 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 TPOP07202 933 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 NR2F1P10589 423 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 PECAM1P16284 738 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 EIF2DP41214 584 aaKnown RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 RGS2P41220 211 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 ARCN1P48444 511 aaKnown RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 RAB15P59190 212 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 KRT85P78386 507 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 DSG1Q02413 1049 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 TBC1D8BQ0IIM8 1120 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 HNRNPDQ14103 355 aaKnown RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 PFKFB3Q16875 520 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 Q3ZCU0 254 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 SH3PXD2AQ5TCZ1 1133 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 GADL1Q6ZQY3 521 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 MICALCLQ6ZW33 695 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 RABEPKQ7Z6M1 372 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 TREML1Q86YW5 311 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 FOXP4Q8IVH2 680 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 DNAJC5GQ8N7S2 189 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 C3orf20Q8ND61 904 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 NEK11Q8NG66 645 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 GATAD2BQ8WXI9 593 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 AUTS2Q8WXX7 1259 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 SLC35B4Q969S0 331 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 PPP1R14AQ96A00 147 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 IFT43Q96FT9 208 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZKSCAN3Q9BRR0 538 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 ITPAQ9BY32 194 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 SUV39H2Q9H5I1 410 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 FAM86C1Q9NVL1 165 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 MAD2L2Q9UI95 211 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 R3HDM2Q9Y2K5 976 aaKnown RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 PCDHB5Q9Y5E4 795 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 SNX9Q9Y5X1 595 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 RPAP1Q9BWH6 1393 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 CCL15-CCL14A0A0B4J2E2 113 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 PMS2P1A4D2B8 440 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 FAM205CA6NFA0 338 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 A8MV72 311 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 SCAMP1O15126 338 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 KRT86O43790 486 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 PHACTR2O75167 634 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 RECQL4O94761 1208 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 SCAF4O95104 1147 aaKnown RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 TUBB4AP04350 444 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 IVLP07476 585 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 FGF4P08620 206 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ENO2P09104 434 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 RHOQP17081 205 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 PTPRAP18433 802 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 IL10P22301 178 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 GALP22466 123 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 PTBP1P26599 531 aaKnown RBP eCLIP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 CSTF2P33240 577 aaKnown RBP eCLIP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ADRA1BP35368 520 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 KRT2P35908 639 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 TXLNAP40222 546 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 HTR2BP41595 481 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 STAT5AP42229 794 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 AFF1P51825 1210 aaKnown RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 HMGCS2P54868 508 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 OTUD4Q01804 1114 aaKnown RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 TAP2Q03519 686 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 LIPEQ05469 1076 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 MPP2Q14168 576 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 NCAPHQ15003 741 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZRSR1Q15695 479 aaKnown RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 CNGA2Q16280 664 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms