RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 KCTD20Q7Z5Y7 419 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 PCGF5Q86SE9 256 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 ZNF329Q86UD4 541 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 C12orf76Q8N812 135 aaPredicted RBP3.41□□□□□ -1.86
SUB1-208ENST00000511175 NEUROG1Q92886 237 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 HPS3Q969F9 1004 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 MIB2Q96AX9 1013 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 MSI2Q96DH6 328 aaKnown RBP3.41□□□□□ -1.86
SUB1-208ENST00000511175 CGRRF1Q99675 332 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 HERPUD2Q9BSE4 406 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 MSRB1Q9NZV6 116 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 ANAPC4Q9UJX5 808 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 PCDHA12Q9UN75 941 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 LZTS1Q9Y250 596 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 PRSS47A8MTI9 375 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 AGPSO00116 658 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 GRID2O43424 1007 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 OFD1O75665 1012 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 SETSIPP0DME0 302 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 EPHA3P29320 983 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 HALP42357 657 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 ARFIP2P53365 341 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 PGGT1BP53609 377 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 P2RX3P56373 397 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 FOXD4Q12950 439 aaPredicted RBP3.4□□□□□ -1.87
SUB1-208ENST00000511175 MAPRE1Q15691 268 aaKnown RBP3.4□□□□□ -1.87
SUB1-208ENST00000511175 FAM110CQ1W6H9 321 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 ANO1Q5XXA6 986 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 NUGGCQ68CJ6 796 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 LMBRD2Q68DH5 695 aaPredicted RBP3.4□□□□□ -1.87
SUB1-208ENST00000511175 OVCH2Q7RTZ1 564 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 SRLQ86TD4 932 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 FAM186BQ8IYM0 893 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 MPP5Q8N3R9 675 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 TMEM199Q8N511 208 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 NKAPQ8N5F7 415 aaKnown RBP3.4□□□□□ -1.87
SUB1-208ENST00000511175 ANKRD42Q8N9B4 389 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 PARD3BQ8TEW8 1205 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 DIS3LQ8TF46 1054 aaKnown RBP3.4□□□□□ -1.87
SUB1-208ENST00000511175 MTFMTQ96DP5 389 aaKnown RBP3.4□□□□□ -1.87
SUB1-208ENST00000511175 HIC2Q96JB3 615 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 ACO2Q99798 780 aaKnown RBP3.4□□□□□ -1.87
SUB1-208ENST00000511175 TRIM54Q9BYV2 358 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 TRIM5Q9C035 493 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 USP29Q9HBJ7 922 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 AGO4Q9HCK5 861 aaKnown RBP3.4□□□□□ -1.87
SUB1-208ENST00000511175 GJB4Q9NTQ9 266 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 DECR2Q9NUI1 292 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 PIH1D1Q9NWS0 290 aaKnown RBP3.4□□□□□ -1.87
SUB1-208ENST00000511175 SELENONQ9NZV5 590 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 FNIP2Q9P278 1114 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 STXBP5LQ9Y2K9 1186 aa3.4□□□□□ -1.87
SUB1-208ENST00000511175 SLC22A23A1A5C7 686 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 EXOC5O00471 708 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 BTN3A1O00481 513 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 TLX3O43711 291 aaPredicted RBP3.39□□□□□ -1.87
SUB1-208ENST00000511175 PRAMEF2O60811 474 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 TUSC2O75896 110 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 MYL3P08590 195 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 CD63P08962 238 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 FGF3P11487 239 aaPredicted RBP3.39□□□□□ -1.87
SUB1-208ENST00000511175 HGFP14210 728 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 NPR1P16066 1061 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 ZKSCAN1P17029 563 aaPredicted RBP3.39□□□□□ -1.87
SUB1-208ENST00000511175 ALDH7A1P49419 539 aaKnown RBP3.39□□□□□ -1.87
SUB1-208ENST00000511175 GPC5P78333 572 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 TIAL1Q01085 375 aaKnown RBP eCLIP3.39□□□□□ -1.878e-6■■■□□ 19.2
SUB1-208ENST00000511175 CHAF1AQ13111 956 aaPredicted RBP3.39□□□□□ -1.87
SUB1-208ENST00000511175 STK3Q13188 491 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 FAM57BQ71RH2 274 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 TFAP2DQ7Z6R9 452 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 COL23A1Q86Y22 540 aaPredicted RBP3.39□□□□□ -1.87
SUB1-208ENST00000511175 SPATA2LQ8IUW3 424 aaPredicted RBP3.39□□□□□ -1.87
SUB1-208ENST00000511175 SMAP1Q8IYB5 467 aaPredicted RBP3.39□□□□□ -1.87
SUB1-208ENST00000511175 CPXCR1Q8N123 301 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 FBXL14Q8N1E6 418 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 METTL25Q8N6Q8 603 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 ZBTB34Q8NCN2 500 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 FAM156AQ8NDB6 213 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 VPS37AQ8NEZ2 397 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 TNIP3Q96KP6 325 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 SGCZQ96LD1 299 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 NT5C1BQ96P26 610 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 MYD88Q99836 296 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 TMEM60Q9H2L4 133 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 CNNM1Q9NRU3 951 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 ZSCAN32Q9NX65 697 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 MAP3K20Q9NYL2 800 aaKnown RBP3.39□□□□□ -1.87
SUB1-208ENST00000511175 SWAP70Q9UH65 585 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 CDY1Q9Y6F8 540 aa3.39□□□□□ -1.87
SUB1-208ENST00000511175 NOTCH3Q9UM47 2321 aa3.38□□□□□ -1.87
SUB1-208ENST00000511175 C16orf96A6NNT2 1141 aa3.38□□□□□ -1.87
SUB1-208ENST00000511175 H3BML4 177 aa3.38□□□□□ -1.87
SUB1-208ENST00000511175 NTN3O00634 580 aaPredicted RBP3.38□□□□□ -1.87
SUB1-208ENST00000511175 NPHP1O15259 732 aa3.38□□□□□ -1.87
SUB1-208ENST00000511175 NBNO60934 754 aa3.38□□□□□ -1.87
SUB1-208ENST00000511175 CAMTA2O94983 1202 aa3.38□□□□□ -1.87
SUB1-208ENST00000511175 RASAL1O95294 804 aa3.38□□□□□ -1.87
SUB1-208ENST00000511175 HOXA7P31268 230 aaPredicted RBP3.38□□□□□ -1.87
SUB1-208ENST00000511175 POLD2P49005 469 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms