RNA–Protein interactions for RNA: ENST00000511171.5

LEMD2-209, Transcript of LEM domain containing 2, humanhuman

TSL 2

Gene LEMD2, Length 4,870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-209ENST00000511171 C12orf50Q8NA57 414 aaPredicted RBP13.12□□□□□ -0.31
LEMD2-209ENST00000511171 WNT8BQ93098 351 aa13.12□□□□□ -0.31
LEMD2-209ENST00000511171 NSMCE4AQ9NXX6 385 aa13.12□□□□□ -0.31
LEMD2-209ENST00000511171 DSEQ9UL01 958 aa13.12□□□□□ -0.31
LEMD2-209ENST00000511171 A0A1B0GUL6 1792 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 C2CD2LO14523 706 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 AVILO75366 819 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 C22orf31O95567 290 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 ENPEPQ07075 957 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.11□□□□□ -0.31
LEMD2-209ENST00000511171 FBXO32Q969P5 355 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 SYT17Q9BSW7 474 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 EFHD1Q9BUP0 239 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 TRPC7Q9HCX4 862 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 CHADO15335 359 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 RGS20O76081 388 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 IRF1P10914 325 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 GOT1P17174 413 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 CCND1P24385 295 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 PTP4A2Q12974 167 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 SLC10A6Q3KNW5 377 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 PACS2Q86VP3 889 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 EFHBQ8N7U6 833 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 PCSK9Q8NBP7 692 aaKnown RBP13.11□□□□□ -0.31
LEMD2-209ENST00000511171 LENG1Q96BZ8 264 aaPredicted RBP13.11□□□□□ -0.31
LEMD2-209ENST00000511171 ZBED2Q9BTP6 218 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 DARSP14868 501 aaKnown RBP13.11□□□□□ -0.31
LEMD2-209ENST00000511171 CTXN3Q4LDR2 81 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 RABGAP1LQ5R372 815 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 ZDHHC24Q6UX98 284 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 PGLYRP2Q96PD5 576 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 EIF2AQ9BY44 585 aaKnown RBP13.11□□□□□ -0.31
LEMD2-209ENST00000511171 MINDY3Q9H8M7 445 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 LRRC4CQ9HCJ2 640 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 DCDC2Q9UHG0 476 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 AAR2Q9Y312 384 aaKnown RBP13.11□□□□□ -0.31
LEMD2-209ENST00000511171 CDY1Q9Y6F8 540 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 SRRM3A6NNA2 597 aaPredicted RBP13.11□□□□□ -0.31
LEMD2-209ENST00000511171 ALOX15BO15296 676 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 SHOX2O60902 331 aaPredicted RBP13.11□□□□□ -0.31
LEMD2-209ENST00000511171 YBX3P16989 372 aaKnown RBP eCLIP13.11□□□□□ -0.31
LEMD2-209ENST00000511171 PPARGP37231 505 aaPredicted RBP13.11□□□□□ -0.31
LEMD2-209ENST00000511171 GEMP55040 296 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 MPP3Q13368 585 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 DNAL1Q4LDG9 190 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 C9orf57Q5W0N0 161 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 DDIASQ8IXT1 998 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 ADAM2Q99965 735 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 FICDQ9BVA6 458 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 GPR88Q9GZN0 384 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 TKTL2Q9H0I9 626 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 DMAP1Q9NPF5 467 aaPredicted RBP13.11□□□□□ -0.31
LEMD2-209ENST00000511171 COL1A2P08123 1366 aa13.11□□□□□ -0.31
LEMD2-209ENST00000511171 NCAM2O15394 837 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 ASPAP45381 313 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 SERPINB8P50452 374 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 POU6F1Q14863 301 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 FASTKD3Q14CZ7 662 aaKnown RBP13.1□□□□□ -0.31
LEMD2-209ENST00000511171 RNF168Q8IYW5 571 aaPredicted RBP13.1□□□□□ -0.31
LEMD2-209ENST00000511171 PCDH18Q9HCL0 1135 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 THEGQ9P2T0 379 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 DNAJC16Q9Y2G8 782 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 PCDHB7Q9Y5E2 793 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 SMIM28A0A1B0GU29 152 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 SLC2A3P11169 496 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 SMPD1P17405 629 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 TAF5Q15542 800 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 FAM110CQ1W6H9 321 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 ANKRD20A2Q5SQ80 823 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 ANKRD20A1Q5TYW2 823 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 CALML6Q8TD86 181 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 LGMNQ99538 433 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 ZNF670Q9BS34 389 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 UPF3AQ9H1J1 476 aaKnown RBP13.1□□□□□ -0.31
LEMD2-209ENST00000511171 SUN2Q9UH99 717 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 PTPRJQ12913 1337 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 TIMM44O43615 452 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 KLHL2O95198 593 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 PSMB4P28070 264 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 CCR1P32246 355 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 SNX17Q15036 470 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 N4BP2L1Q5TBK1 243 aaPredicted RBP13.1□□□□□ -0.31
LEMD2-209ENST00000511171 PMF1Q6P1K2 205 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 TFAP2DQ7Z6R9 452 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 ZDHHC18Q9NUE0 388 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 RBM22Q9NW64 420 aaKnown RBP eCLIP13.1□□□□□ -0.311e-7■■■■■ 41.1
LEMD2-209ENST00000511171 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.1□□□□□ -0.31
LEMD2-209ENST00000511171 ACTL7BQ9Y614 415 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 GLTPD2A6NH11 291 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 AIM2O14862 343 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 EFTUD2Q15029 972 aaKnown RBP eCLIP13.1□□□□□ -0.313e-6■□□□□ 11.1
LEMD2-209ENST00000511171 MTFR1Q15390 333 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 TAS1R3Q7RTX0 852 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 ATP6V0D2Q8N8Y2 350 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 FNIP1Q8TF40 1166 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 TSPAN17Q96FV3 270 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 PPP1R2P1Q96PQ5 205 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 TMEM237Q96Q45 408 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 TRPV6Q9H1D0 765 aa13.1□□□□□ -0.31
LEMD2-209ENST00000511171 ACSS3Q9H6R3 686 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms