RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 KCTD15Q96SI1 283 aaPredicted RBP10.18□□□□□ -0.78
PTPN20-221ENST00000509599 TSPAN18Q96SJ8 248 aa10.18□□□□□ -0.78
PTPN20-221ENST00000509599 TTLL2Q9BWV7 592 aa10.18□□□□□ -0.78
PTPN20-221ENST00000509599 ACE2Q9BYF1 805 aaPredicted RBP10.18□□□□□ -0.78
PTPN20-221ENST00000509599 PCNX1Q96RV3 2341 aa10.18□□□□□ -0.78
PTPN20-221ENST00000509599 NAV3Q8IVL0 2385 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 SDK2Q58EX2 2172 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 CELSR1Q9NYQ6 3014 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 SLC16A4O15374 487 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 HCRTO43612 131 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 PPFIA2O75334 1257 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 CSO75390 466 aaKnown RBP10.17□□□□□ -0.78
PTPN20-221ENST00000509599 FSBPO95073 299 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 ABL1P00519 1130 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 CISD3P0C7P0 127 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 ACADMP11310 421 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 TAF6P49848 677 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 RACK1P63244 317 aaKnown RBP10.17□□□□□ -0.78
PTPN20-221ENST00000509599 SGO2Q562F6 1265 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 ZPBP2Q6X784 338 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 PTRH1Q86Y79 214 aaKnown RBP10.17□□□□□ -0.78
PTPN20-221ENST00000509599 CCDC97Q96F63 343 aaPredicted RBP10.17□□□□□ -0.78
PTPN20-221ENST00000509599 SPATA17Q96L03 361 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 SLC6A18Q96N87 628 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 SLC46A1Q96NT5 459 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 DEPDC7Q96QD5 511 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 DUSP9Q99956 384 aaKnown RBP10.17□□□□□ -0.78
PTPN20-221ENST00000509599 ACBD6Q9BR61 282 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 ESYT1Q9BSJ8 1104 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 SLC25A18Q9H1K4 315 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 BHMT2Q9H2M3 363 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 ANO2Q9NQ90 1003 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 GJB4Q9NTQ9 266 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 SATB2Q9UPW6 733 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 RBM19Q9Y4C8 960 aaKnown RBP10.17□□□□□ -0.78
PTPN20-221ENST00000509599 MED13LQ71F56 2210 aa10.17□□□□□ -0.78
PTPN20-221ENST00000509599 CDRT15L2A8MXV6 281 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 KPNA7A9QM74 516 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 NEDD8-MDP1E9PL57 170 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 YKT6O15498 198 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 SPINT1O43278 529 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 OPA1O60313 960 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 HIP1RO75146 1068 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 SEMA4FO95754 770 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 IGHV4-34P06331 123 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 TYRP14679 529 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 ACO1P21399 889 aaKnown RBP10.16□□□□□ -0.78
PTPN20-221ENST00000509599 RPA1P27694 616 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 TNFRSF8P28908 595 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 PDIA3P30101 505 aaKnown RBP10.16□□□□□ -0.78
PTPN20-221ENST00000509599 MATR3P43243 847 aaKnown RBP eCLIP10.16□□□□□ -0.78
PTPN20-221ENST00000509599 MAGEA11P43364 429 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 ZNF132P52740 706 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 INHBCP55103 352 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 ASIC1P78348 528 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 MAPK7Q13164 816 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 SRSF6Q13247 344 aaKnown RBP10.16□□□□□ -0.78
PTPN20-221ENST00000509599 TMEM132DQ14C87 1099 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 ECM1Q16610 540 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 C3orf38Q5JPI3 329 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 DENND5BQ6ZUT9 1274 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 Q6ZVU0 165 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 USP53Q70EK8 1073 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 SPATA2LQ8IUW3 424 aaPredicted RBP10.16□□□□□ -0.78
PTPN20-221ENST00000509599 ADGRF2Q8IZF7 708 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 PDCL2Q8N4E4 241 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 SGF29Q96ES7 293 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 PRR11Q96HE9 360 aaPredicted RBP10.16□□□□□ -0.78
PTPN20-221ENST00000509599 FUBP3Q96I24 572 aaKnown RBP eCLIP10.16□□□□□ -0.78
PTPN20-221ENST00000509599 BBS2Q9BXC9 721 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 AGXT2Q9BYV1 514 aa10.16□□□□□ -0.78
PTPN20-221ENST00000509599 DDX43Q9NXZ2 648 aaKnown RBP10.16□□□□□ -0.78
PTPN20-221ENST00000509599 THAP10Q9P2Z0 257 aaPredicted RBP10.16□□□□□ -0.78
PTPN20-221ENST00000509599 ATXN7L1Q9ULK2 861 aaPredicted RBP10.16□□□□□ -0.78
PTPN20-221ENST00000509599 SPENQ96T58 3664 aaKnown RBP10.16□□□□□ -0.78
PTPN20-221ENST00000509599 SCN8AQ9UQD0 1980 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 ADGRG4Q8IZF6 3080 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 PMS2P1A4D2B8 440 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 COCHO43405 550 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 SYNCRIPO60506 623 aaKnown RBP10.15□□□□□ -0.78
PTPN20-221ENST00000509599 NEMFO60524 1076 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 HMGB1P09429 215 aaKnown RBP10.15□□□□□ -0.78
PTPN20-221ENST00000509599 PRKCHP24723 683 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 PPP3CCP48454 512 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 DGKGP49619 791 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 MYL7Q01449 175 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 DHX9Q08211 1270 aaKnown RBP10.15□□□□□ -0.78
PTPN20-221ENST00000509599 STRN3Q13033 797 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 NR6A1Q15406 480 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 OSTM1Q86WC4 334 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 TICAM1Q8IUC6 712 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 ZNF564Q8TBZ8 553 aaPredicted RBP10.15□□□□□ -0.78
PTPN20-221ENST00000509599 P2RY11Q96G91 374 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 XPO6Q96QU8 1125 aaKnown RBP10.15□□□□□ -0.78
PTPN20-221ENST00000509599 TMEM60Q9H2L4 133 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 L1RE1Q9UN81 338 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 SH3BP1Q9Y3L3 701 aa10.15□□□□□ -0.78
PTPN20-221ENST00000509599 SFI1A8K8P3 1242 aa10.14□□□□□ -0.79
PTPN20-221ENST00000509599 TRIM38O00635 465 aa10.14□□□□□ -0.79
PTPN20-221ENST00000509599 WNT9AO14904 365 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms