RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 TEX264Q9Y6I9 313 aa9.57□□□□□ -0.88
HTT-205ENST00000509043 THSD7BQ9C0I4 1608 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 COL4A4P53420 1690 aaPredicted RBP9.56□□□□□ -0.88
HTT-205ENST00000509043 A0A0A0MRY4 1105 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 IQANK1A0A1B0GTG1 560 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 MYBPHLA2RUH7 354 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 CASTOR2A6NHX0 329 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 MEIS3P2A8K0S8 358 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 HHLA1C9JL84 531 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 AP3B1O00203 1094 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 CLDN5O00501 218 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 MGEA5O60502 916 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 ZWINTO95229 277 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 KRT15P19012 456 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 SERPINB6P35237 376 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 MSH2P43246 934 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 CXCR3P49682 368 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 GPX6P59796 221 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 TRIM32Q13049 653 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 NAB1Q13506 487 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 DPYSQ14117 519 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 PRKD1Q15139 912 aaPredicted RBP9.56□□□□□ -0.88
HTT-205ENST00000509043 TMED2Q15363 201 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 DEFB115Q30KQ5 88 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 BBS9Q3SYG4 887 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 RAB6CQ53S08 254 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 FNBP1LQ5T0N5 605 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 UBAP2Q5T6F2 1119 aaKnown RBP9.56□□□□□ -0.88
HTT-205ENST00000509043 ACBD5Q5T8D3 534 aaPredicted RBP9.56□□□□□ -0.88
HTT-205ENST00000509043 OTUD1Q5VV17 481 aaPredicted RBP9.56□□□□□ -0.88
HTT-205ENST00000509043 KIAA0319Q5VV43 1072 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 OVOS1Q6IE37 1185 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 ZNF449Q6P9G9 518 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 KCNT2Q6UVM3 1135 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 RGS9BPQ6ZS82 235 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 RFX8Q6ZV50 586 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 PIGWQ7Z7B1 504 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 FAM131BQ86XD5 332 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 SRRM1Q8IYB3 904 aaKnown RBP9.56□□□□□ -0.88
HTT-205ENST00000509043 DCP1BQ8IZD4 617 aaKnown RBP9.56□□□□□ -0.88
HTT-205ENST00000509043 CCDC197Q8NCU1 140 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 C3orf58Q8NDZ4 430 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 ZMIZ2Q8NF64 920 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 MDM1Q8TC05 714 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 RAET1EQ8TD07 263 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 HTR3CQ8WXA8 447 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 LPPQ93052 612 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 MYLPFQ96A32 169 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 FUBP3Q96I24 572 aaKnown RBP eCLIP9.56□□□□□ -0.88
HTT-205ENST00000509043 CABS1Q96KC9 395 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 MAGEB18Q96M61 343 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 PWWP2AQ96N64 755 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 SPATA13Q96N96 652 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 PPP1R2P1Q96PQ5 205 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 VAT1Q99536 393 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 PKMYT1Q99640 499 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 EPAS1Q99814 870 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 OXCT2Q9BYC2 517 aaPredicted RBP9.56□□□□□ -0.88
HTT-205ENST00000509043 RAB6CQ9H0N0 254 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 TRABDQ9H4I3 376 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 ELAC1Q9H777 363 aaKnown RBP9.56□□□□□ -0.88
HTT-205ENST00000509043 KCNK9Q9NPC2 374 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 ARHGEF4Q9NR80 690 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 RNF19AQ9NV58 838 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 DTLQ9NZJ0 730 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 ZNF180Q9UJW8 692 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 FBXW11Q9UKB1 542 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 IKBKGQ9Y6K9 419 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 FAM169AQ9Y6X4 670 aa9.56□□□□□ -0.88
HTT-205ENST00000509043 ERI2A8K979 691 aaKnown RBP9.55□□□□□ -0.88
HTT-205ENST00000509043 GOLGA8MH3BSY2 632 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 EEF2KO00418 725 aaKnown RBP9.55□□□□□ -0.88
HTT-205ENST00000509043 KIF3CO14782 793 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 TM9SF1O15321 606 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 BEST1O76090 585 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 OAZ2O95190 189 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 CKBP12277 381 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 NCAM1P13591 858 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 ELNP15502 786 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 GOT1P17174 413 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 TFE3P19532 575 aaPredicted RBP9.55□□□□□ -0.88
HTT-205ENST00000509043 GCAP28676 217 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 MAP2K2P36507 400 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 ELK3P41970 407 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 MAGEA3P43357 314 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 COG7P83436 770 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 GBE1Q04446 702 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 DSC1Q08554 894 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 SMARCB1Q12824 385 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 SEMA3BQ13214 749 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 SPARCL1Q14515 664 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 FASTKD3Q14CZ7 662 aaKnown RBP9.55□□□□□ -0.88
HTT-205ENST00000509043 NFE2Q16621 373 aaPredicted RBP9.55□□□□□ -0.88
HTT-205ENST00000509043 PARP6Q2NL67 630 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 BRMS1LQ5PSV4 323 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 FOXR1Q6PIV2 292 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 C6orf89Q6UWU4 347 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 ARHGAP18Q8N392 663 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 OTUD6BQ8N6M0 293 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 RNF169Q8NCN4 708 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms