RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 FAM13BQ9NYF5 915 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 NCKIPSDQ9NZQ3 722 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 CFAP97Q9P2B7 532 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 WRAP73Q9P2S5 460 aaPredicted RBP4.5□□□□□ -1.69
CPNE4-204ENST00000505331 PRDM4Q9UKN5 801 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 DSEQ9UL01 958 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 PCDHB5Q9Y5E4 795 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.5□□□□□ -1.69
CPNE4-204ENST00000505331 CPQQ9Y646 472 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 KNTC1P50748 2209 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 GON4LQ3T8J9 2241 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 TDRD15B5MCY1 1934 aaKnown RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 LY6G6EA0A0G2JKS1 128 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 ZNF891A8MT65 544 aaPredicted RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 PRSS44E7EML9 344 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 MKRN2OSH3BPM6 223 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 HIP1O00291 1037 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 CAPN5O15484 640 aaPredicted RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 GRID2O43424 1007 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 CACNG3O60359 315 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 PRPF40AO75400 957 aaKnown RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 OLFM2O95897 454 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 CYP11A1P05108 521 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 PTMAP06454 111 aaKnown RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 JMJD7P0C870 316 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 MX1P20591 662 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 ACO1P21399 889 aaKnown RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 DGKAP23743 735 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 LRPAP1P30533 357 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 DGKGP49619 791 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 GPR15P49685 360 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 ATP1A2P50993 1020 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 CDH8P55286 799 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 RNASE9P60153 205 aaKnown RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 OVGP1Q12889 678 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 ZNF177Q13360 481 aaPredicted RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 SAFBQ15424 915 aaKnown RBP eCLIP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 Q4G0T1 1027 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 ZRANB3Q5FWF4 1079 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 TMTC3Q6ZXV5 915 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 LRRTM3Q86VH5 581 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 IQCHQ86VS3 1027 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 ZFAND4Q86XD8 727 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 SPATS2Q86XZ4 545 aaKnown RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 XYLT1Q86Y38 959 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 TMEM25Q86YD3 366 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 CCDC13Q8IYE1 715 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 REXO1Q8N1G1 1221 aaKnown RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 THEM5Q8N1Q8 247 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 ZNF276Q8N554 614 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 MFSD2AQ8NA29 543 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 STKLD1Q8NE28 680 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 GPBAR1Q8TDU6 330 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 IGDCC4Q8TDY8 1250 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 LXNQ9BS40 222 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 DUSP23Q9BVJ7 150 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 STRADBQ9C0K7 418 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 RNF38Q9H0F5 515 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 POLR3FQ9H1D9 316 aaPredicted RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 RBSNQ9H1K0 784 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 ZSWIM4Q9H7M6 989 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 GJB4Q9NTQ9 266 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 NLGN3Q9NZ94 848 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 TRPM5Q9NZQ8 1165 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 THAP10Q9P2Z0 257 aaPredicted RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 TPX2Q9ULW0 747 aaKnown RBP4.49□□□□□ -1.69
CPNE4-204ENST00000505331 TNFSF13BQ9Y275 285 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 KIF3AQ9Y496 699 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 U3KQA8 63 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 ANK1P16157 1881 aa4.49□□□□□ -1.69
CPNE4-204ENST00000505331 MYH6P13533 1939 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 MYO16Q9Y6X6 1858 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 PRAMEF33A0A0G2JMD5 474 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 NEMP2A6NFY4 417 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 FAM47DPA6NHR8 397 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 NEDD8-MDP1E9PL57 170 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 EML1O00423 815 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 WNT9AO14904 365 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 FFAR2O15552 330 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 PRICKLE3O43900 615 aaPredicted RBP4.48□□□□□ -1.69
CPNE4-204ENST00000505331 PRAMEF10O60809 474 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 DNTTP04053 509 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 EPHX1P07099 455 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 GIMD1P0DJR0 217 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 TYRP14679 529 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 NR1D1P20393 614 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 PPP3CCP48454 512 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 PDX1P52945 283 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 PER3P56645 1201 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 OSTNP61366 133 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 MYL7Q01449 175 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 LTBQ06643 244 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 SSRP1Q08945 709 aaKnown RBP4.48□□□□□ -1.69
CPNE4-204ENST00000505331 PPP2R5CQ13362 524 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 FGL2Q14314 439 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 ZRSR2Q15696 482 aaKnown RBP4.48□□□□□ -1.69
CPNE4-204ENST00000505331 NFE2Q16621 373 aaPredicted RBP4.48□□□□□ -1.69
CPNE4-204ENST00000505331 DDR2Q16832 855 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms