RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 FAM98AQ8NCA5 519 aaKnown RBP6.47□□□□□ -1.37
VPS26A-206ENST00000489794 ISCA1Q9BUE6 129 aa6.47□□□□□ -1.37
VPS26A-206ENST00000489794 VPS45Q9NRW7 570 aa6.47□□□□□ -1.37
VPS26A-206ENST00000489794 LPAR3Q9UBY5 353 aa6.47□□□□□ -1.37
VPS26A-206ENST00000489794 ASAP1Q9ULH1 1129 aa6.47□□□□□ -1.37
VPS26A-206ENST00000489794 COX11Q9Y6N1 276 aa6.47□□□□□ -1.37
VPS26A-206ENST00000489794 NBNO60934 754 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 C1RP00736 705 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 SLC3A2P08195 630 aaKnown RBP6.46□□□□□ -1.38
VPS26A-206ENST00000489794 AKT1P31749 480 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 JAK3P52333 1124 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 NHLH1Q02575 133 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 PRKG1Q13976 671 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 LARS2Q15031 903 aaKnown RBP6.46□□□□□ -1.38
VPS26A-206ENST00000489794 FAM187BQ17R55 369 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 TBRG1Q3YBR2 411 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 TUBB8Q3ZCM7 444 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 ZNF569Q5MCW4 686 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 ACSM6Q6P461 480 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 TMEM65Q6PI78 240 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 DCDC5Q6ZRR9 648 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 ADGRG3Q86Y34 549 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 SLC44A2Q8IWA5 706 aaPredicted RBP6.46□□□□□ -1.38
VPS26A-206ENST00000489794 EXOC8Q8IYI6 725 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 GALNT15Q8N3T1 639 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 MAFAQ8NHW3 353 aaPredicted RBP6.46□□□□□ -1.38
VPS26A-206ENST00000489794 STT3BQ8TCJ2 826 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 OTUD7AQ8TE49 926 aaPredicted RBP6.46□□□□□ -1.38
VPS26A-206ENST00000489794 ZG16BQ96DA0 208 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 ADGRE3Q9BY15 652 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 PPCSQ9HAB8 311 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 SAYSD1Q9NPB0 183 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 PRDM8Q9NQV8 689 aa6.46□□□□□ -1.38
VPS26A-206ENST00000489794 MORC2Q9Y6X9 1032 aaPredicted RBP6.46□□□□□ -1.38
VPS26A-206ENST00000489794 C1QL1O75973 258 aa6.45□□□□□ -1.38
VPS26A-206ENST00000489794 KLRK1P26718 216 aa6.45□□□□□ -1.38
VPS26A-206ENST00000489794 GALNSP34059 522 aa6.45□□□□□ -1.38
VPS26A-206ENST00000489794 HALP42357 657 aa6.45□□□□□ -1.38
VPS26A-206ENST00000489794 KCNB1Q14721 858 aa6.45□□□□□ -1.38
VPS26A-206ENST00000489794 RD3Q7Z3Z2 195 aa6.45□□□□□ -1.38
VPS26A-206ENST00000489794 ANKRD42Q8N9B4 389 aa6.45□□□□□ -1.38
VPS26A-206ENST00000489794 HASPINQ8TF76 798 aa6.45□□□□□ -1.38
VPS26A-206ENST00000489794 SLC22A17Q8WUG5 538 aa6.45□□□□□ -1.38
VPS26A-206ENST00000489794 MACROD1Q9BQ69 325 aa6.45□□□□□ -1.38
VPS26A-206ENST00000489794 PABPC3Q9H361 631 aaKnown RBP6.45□□□□□ -1.38
VPS26A-206ENST00000489794 SLITRK6Q9H5Y7 841 aa6.45□□□□□ -1.38
VPS26A-206ENST00000489794 SAP30LQ9HAJ7 183 aa6.45□□□□□ -1.38
VPS26A-206ENST00000489794 C19orf53Q9UNZ5 99 aaPredicted RBP6.45□□□□□ -1.38
VPS26A-206ENST00000489794 SCAF8Q9UPN6 1271 aaKnown RBP6.45□□□□□ -1.38
VPS26A-206ENST00000489794 PCDHB7Q9Y5E2 793 aa6.45□□□□□ -1.38
VPS26A-206ENST00000489794 CCDC187A0A096LP49 1063 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 CLIC1O00299 241 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 CER1O95813 267 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 TUBA4AP68366 448 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 MFSD13AQ14CX5 517 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 SMN1Q16637 294 aaKnown RBP6.44□□□□□ -1.38
VPS26A-206ENST00000489794 KRTAP15-1Q3LI76 137 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 GLE1Q53GS7 698 aaKnown RBP6.44□□□□□ -1.38
VPS26A-206ENST00000489794 INO80DQ53TQ3 878 aaPredicted RBP6.44□□□□□ -1.38
VPS26A-206ENST00000489794 SEMA6DQ8NFY4 1073 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 CPT1BQ92523 772 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 REXO5Q96IC2 774 aaKnown RBP6.44□□□□□ -1.38
VPS26A-206ENST00000489794 DDX23Q9BUQ8 820 aaKnown RBP6.44□□□□□ -1.38
VPS26A-206ENST00000489794 CDCP1Q9H5V8 836 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 ABHD10Q9NUJ1 306 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 LIN7CQ9NUP9 197 aaKnown RBP6.44□□□□□ -1.38
VPS26A-206ENST00000489794 TMLHEQ9NVH6 421 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 ASIC5Q9NY37 505 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 NDUFAF4Q9P032 175 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 SEMA5BQ9P283 1151 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 GRHPRQ9UBQ7 328 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 SERGEFQ9UGK8 458 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 CNTN6Q9UQ52 1028 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 SPATA31A6Q5VVP1 1343 aa6.44□□□□□ -1.38
VPS26A-206ENST00000489794 TCRBV5S1A1TA0A578 114 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 TMEM232C9JQI7 657 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 IRAK2O43187 625 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 PRAMEF2O60811 474 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 RPP40O75818 363 aaKnown RBP6.43□□□□□ -1.38
VPS26A-206ENST00000489794 CST5P28325 142 aaPredicted RBP6.43□□□□□ -1.38
VPS26A-206ENST00000489794 MCM2P49736 904 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 WDR5P61964 334 aaKnown RBP6.43□□□□□ -1.38
VPS26A-206ENST00000489794 RAE1P78406 368 aaKnown RBP6.43□□□□□ -1.38
VPS26A-206ENST00000489794 CNGA3Q16281 694 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 PROSER3Q2NL68 480 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 PRAMEF17Q5VTA0 474 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 SULT6B1Q6IMI4 303 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 LIN54Q6MZP7 749 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 C16orf71Q8IYS4 520 aaPredicted RBP6.43□□□□□ -1.38
VPS26A-206ENST00000489794 SDCCAG3Q96C92 435 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 KAZALD1Q96I82 304 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 SCLT1Q96NL6 688 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 ASB2Q96Q27 587 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 CCDC134Q9H6E4 229 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 ZBTB1Q9Y2K1 713 aa6.43□□□□□ -1.38
VPS26A-206ENST00000489794 SIRT4Q9Y6E7 314 aaPredicted RBP6.43□□□□□ -1.38
VPS26A-206ENST00000489794 LOC105369274A0A096LPK9 316 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 LOC102723532A0A0G2JNH3 316 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 FAM90A18PA6NE21 464 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 FAM90A16PA6NEW6 464 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms