RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 MON1AQ86VX9 555 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 IQCKQ8N0W5 287 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 LRRC45Q96CN5 670 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 MCOLN1Q9GZU1 580 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 ACBD3Q9H3P7 528 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 ARHGEF4Q9NR80 690 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 OSER1Q9NX31 292 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 SLC27A5Q9Y2P5 690 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 DOCK4Q8N1I0 1966 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 A0A1W2PQH9 124 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 SPDYE4A6NLX3 237 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 H3BQF6 201 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 H3BRJ5 948 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 SGK1O00141 431 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 RTN3O95197 1032 aaPredicted RBP9.79□□□□□ -0.84
SF3B1-211ENST00000487698 ZSCAN5DPP0CG00 497 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 ETS1P14921 441 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 ATF6P18850 670 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 EN2P19622 333 aaPredicted RBP9.79□□□□□ -0.84
SF3B1-211ENST00000487698 HSD17B3P37058 310 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 ARL4AP40617 200 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 GLUD2P49448 558 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 VPS41P49754 854 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 ITGA8P53708 1063 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 CAV1Q03135 178 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 DHX9Q08211 1270 aaKnown RBP9.79□□□□□ -0.84
SF3B1-211ENST00000487698 SPDYCQ5MJ68 293 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 ALS2CLQ60I27 953 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 HIBCHQ6NVY1 386 aaPredicted RBP9.79□□□□□ -0.84
SF3B1-211ENST00000487698 C1orf228Q6PIY5 440 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 DENND5BQ6ZUT9 1274 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 OTOP2Q7RTS6 562 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 UNC45BQ8IWX7 931 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 ARHGAP18Q8N392 663 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 BBOF1Q8ND07 529 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 RTP4Q96DX8 246 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 TMEM169Q96HH4 297 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 CEP295NLQ96MC4 621 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 SEPT5Q99719 369 aaPredicted RBP9.79□□□□□ -0.84
SF3B1-211ENST00000487698 CLSTN3Q9BQT9 956 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 ADAM7Q9H2U9 754 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 C10orf88Q9H8K7 445 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 ETNK2Q9NVF9 386 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 COMMD8Q9NX08 183 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 MTRF1LQ9UGC7 380 aaKnown RBP9.79□□□□□ -0.84
SF3B1-211ENST00000487698 ANAPC1Q9H1A4 1944 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 GOLGA6BA6NDN3 693 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 FAM72CH0Y354 149 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 DNALI1O14645 258 aaPredicted RBP9.78□□□□□ -0.84
SF3B1-211ENST00000487698 RRP9O43818 475 aaKnown RBP9.78□□□□□ -0.84
SF3B1-211ENST00000487698 ABLIM3O94929 683 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 LINC00271P0C7V0 271 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 RPL17P18621 184 aaKnown RBP9.78□□□□□ -0.84
SF3B1-211ENST00000487698 AMPD1P23109 780 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 YWHAQP27348 245 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 OR1D2P34982 312 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 HCAR3P49019 387 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 NR2C2P49116 596 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 RPL10AP62906 217 aaKnown RBP9.78□□□□□ -0.84
SF3B1-211ENST00000487698 HTRA4P83105 476 aaPredicted RBP9.78□□□□□ -0.84
SF3B1-211ENST00000487698 GBE1Q04446 702 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 SLC10A2Q12908 348 aaPredicted RBP9.78□□□□□ -0.84
SF3B1-211ENST00000487698 DUSP4Q13115 394 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 XRCC4Q13426 336 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 PPIGQ13427 754 aaKnown RBP eCLIP9.78□□□□□ -0.845e-11■□□□□ 10.3
SF3B1-211ENST00000487698 MTMR3Q13615 1198 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 P3H1Q32P28 736 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 ARL13BQ3SXY8 428 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 MGAT5BQ3V5L5 792 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 SPOUT1Q5T280 376 aaKnown RBP9.78□□□□□ -0.84
SF3B1-211ENST00000487698 FAM72AQ5TYM5 149 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 IZUMO3Q5VZ72 239 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 FAM72DQ6L9T8 149 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 DDX53Q86TM3 631 aaKnown RBP9.78□□□□□ -0.84
SF3B1-211ENST00000487698 FAM72BQ86X60 149 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 GPR152Q8TDT2 470 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 CASP10Q92851 521 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 OLFM3Q96PB7 478 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 TKTL2Q9H0I9 626 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 EPB41L4BQ9H329 900 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 WDCPQ9H6R7 721 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 USP29Q9HBJ7 922 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 AAASQ9NRG9 546 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 ARHGEF38Q9NXL2 777 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 SPG21Q9NZD8 308 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 GMIPQ9P107 970 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 HSFX1Q9UBD0 423 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 MFHAS1Q9Y4C4 1052 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 HEY1Q9Y5J3 304 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 OBSL1O75147 1896 aa9.78□□□□□ -0.84
SF3B1-211ENST00000487698 BCLAF3A2AJT9 711 aaKnown RBP9.77□□□□□ -0.84
SF3B1-211ENST00000487698 EEF2KO00418 725 aaKnown RBP9.77□□□□□ -0.84
SF3B1-211ENST00000487698 DCLK1O15075 740 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 GJB5O95377 273 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 SYF2O95926 243 aaKnown RBP9.77□□□□□ -0.84
SF3B1-211ENST00000487698 STIP1P31948 543 aaKnown RBP9.77□□□□□ -0.84
SF3B1-211ENST00000487698 ZNF135P52742 658 aaPredicted RBP9.77□□□□□ -0.84
SF3B1-211ENST00000487698 FPGSQ05932 587 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 BRMS1LQ5PSV4 323 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 RFX8Q6ZV50 586 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms