RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 RBBP8NLQ8NC74 664 aaPredicted RBP17.44■□□□□ 0.38
USP40-212ENST00000473191 EHBP1Q8NDI1 1231 aa17.44■□□□□ 0.38
USP40-212ENST00000473191 KCNV2Q8TDN2 545 aa17.44■□□□□ 0.38
USP40-212ENST00000473191 SORCS1Q8WY21 1168 aa17.44■□□□□ 0.38
USP40-212ENST00000473191 PIGKQ92643 395 aa17.44■□□□□ 0.38
USP40-212ENST00000473191 IPO9Q96P70 1041 aaKnown RBP17.44■□□□□ 0.38
USP40-212ENST00000473191 CDK5RAP1Q96SZ6 601 aaKnown RBP17.44■□□□□ 0.38
USP40-212ENST00000473191 GABRG3Q99928 467 aa17.44■□□□□ 0.38
USP40-212ENST00000473191 EDEM2Q9BV94 578 aa17.44■□□□□ 0.38
USP40-212ENST00000473191 GTPBP4Q9BZE4 634 aaKnown RBP17.44■□□□□ 0.38
USP40-212ENST00000473191 PLXND1Q9Y4D7 1925 aa17.44■□□□□ 0.38
USP40-212ENST00000473191 BICDL2A1A5D9 508 aa17.43■□□□□ 0.38
USP40-212ENST00000473191 SETSIPP0DME0 302 aa17.43■□□□□ 0.38
USP40-212ENST00000473191 PPP1R2P41236 205 aa17.43■□□□□ 0.38
USP40-212ENST00000473191 IL12RB1P42701 662 aa17.43■□□□□ 0.38
USP40-212ENST00000473191 MARSP56192 900 aaKnown RBP17.43■□□□□ 0.38
USP40-212ENST00000473191 RNF43Q68DV7 783 aa17.43■□□□□ 0.38
USP40-212ENST00000473191 CYP2U1Q7Z449 544 aa17.43■□□□□ 0.38
USP40-212ENST00000473191 FAM217AQ8IXS0 508 aa17.43■□□□□ 0.38
USP40-212ENST00000473191 SIX6OS1Q8N1H7 587 aa17.43■□□□□ 0.38
USP40-212ENST00000473191 PIWIL1Q96J94 861 aaKnown RBP17.43■□□□□ 0.38
USP40-212ENST00000473191 INTS2Q9H0H0 1204 aaKnown RBP17.43■□□□□ 0.38
USP40-212ENST00000473191 GOLGA6L7A0A1B0GV03 622 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 C4orf47A7E2U8 309 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 CDX4O14627 284 aaPredicted RBP17.42■□□□□ 0.38
USP40-212ENST00000473191 AFPP02771 609 aaKnown RBP17.42■□□□□ 0.38
USP40-212ENST00000473191 FYNP06241 537 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 ADRB1P08588 477 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 ITPKAP23677 461 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 CHKAP35790 457 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 CNGA2Q16280 664 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 PREPLQ4J6C6 727 aaPredicted RBP17.42■□□□□ 0.38
USP40-212ENST00000473191 IL31Q6EBC2 164 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 FOXR2Q6PJQ5 311 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 TRMT11Q7Z4G4 463 aaKnown RBP17.42■□□□□ 0.38
USP40-212ENST00000473191 CPXM2Q8N436 756 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 PLD4Q96BZ4 506 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 MYEOVQ96EZ4 313 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 CNTNAP3BQ96NU0 1288 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 CRACR2AQ9BSW2 395 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 CNTNAP3Q9BZ76 1288 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 DCLK3Q9C098 648 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 MIS12Q9H081 205 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 CNGB3Q9NQW8 809 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 STRIP2Q9ULQ0 834 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 CYP8B1Q9UNU6 501 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 ZNF510Q9Y2H8 683 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 SLC27A6Q9Y2P4 619 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.42■□□□□ 0.38
USP40-212ENST00000473191 STON1Q9Y6Q2 735 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 CEP192Q8TEP8 1941 aa17.42■□□□□ 0.38
USP40-212ENST00000473191 IGHV1OR15-9A0A0B4J2B8 117 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 GFRA2O00451 464 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 P4HA2O15460 535 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 MAP3K13O43283 966 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 FOXD2O60548 495 aaPredicted RBP17.41■□□□□ 0.38
USP40-212ENST00000473191 HOXD9P28356 352 aaPredicted RBP17.41■□□□□ 0.38
USP40-212ENST00000473191 GCNT1Q02742 428 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 DENND1BQ6P3S1 775 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 NUDT18Q6ZVK8 323 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 LPCAT2Q7L5N7 544 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 IRF2BP1Q8IU81 584 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 CREBRFQ8IUR6 639 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 SLC41A1Q8IVJ1 513 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 WFDC5Q8TCV5 224 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 DDI1Q8WTU0 396 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 RNF139Q8WU17 664 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 SPACA7Q96KW9 195 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 MRGPRX1Q96LB2 322 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 UBE2TQ9NPD8 197 aaPredicted RBP17.41■□□□□ 0.38
USP40-212ENST00000473191 KIAA1468Q9P260 1216 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 CYTH4Q9UIA0 394 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 AJAP1Q9UKB5 411 aaPredicted RBP17.41■□□□□ 0.38
USP40-212ENST00000473191 KIAA1257Q9ULG3 409 aa17.41■□□□□ 0.38
USP40-212ENST00000473191 GIPC1O14908 333 aa17.4■□□□□ 0.38
USP40-212ENST00000473191 SLC9A1P19634 815 aa17.4■□□□□ 0.38
USP40-212ENST00000473191 PRKCHP24723 683 aa17.4■□□□□ 0.38
USP40-212ENST00000473191 SLC6A4P31645 630 aa17.4■□□□□ 0.38
USP40-212ENST00000473191 GPD2P43304 727 aa17.4■□□□□ 0.38
USP40-212ENST00000473191 RPL6Q02878 288 aaKnown RBP17.4■□□□□ 0.38
USP40-212ENST00000473191 FUT11Q495W5 492 aa17.4■□□□□ 0.38
USP40-212ENST00000473191 N4BP2L1Q5TBK1 243 aaPredicted RBP17.4■□□□□ 0.38
USP40-212ENST00000473191 RFWD3Q6PCD5 774 aa17.4■□□□□ 0.38
USP40-212ENST00000473191 C11orf74Q86VG3 221 aa17.4■□□□□ 0.38
USP40-212ENST00000473191 SCML4Q8N228 414 aa17.4■□□□□ 0.38
USP40-212ENST00000473191 LSM14BQ9BX40 385 aaKnown RBP17.4■□□□□ 0.38
USP40-212ENST00000473191 MKRN2Q9H000 416 aaKnown RBP17.4■□□□□ 0.38
USP40-212ENST00000473191 ABCC13Q9NSE7 274 aa17.4■□□□□ 0.38
USP40-212ENST00000473191 OLA1Q9NTK5 396 aaKnown RBP17.4■□□□□ 0.38
USP40-212ENST00000473191 THAP10Q9P2Z0 257 aaPredicted RBP17.4■□□□□ 0.38
USP40-212ENST00000473191 TJP2Q9UDY2 1190 aa17.4■□□□□ 0.38
USP40-212ENST00000473191 CNTN6Q9UQ52 1028 aa17.4■□□□□ 0.38
USP40-212ENST00000473191 ADAMTS9Q9P2N4 1935 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 NCOR2Q9Y618 2525 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 BECN2A8MW95 431 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 KHNYNO15037 678 aaKnown RBP17.39■□□□□ 0.37
USP40-212ENST00000473191 IGLV3-27P01718 113 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 LTFP02788 710 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 KRT5P13647 590 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 HLA-FP30511 346 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms