RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 ACP6Q9NPH0 428 aa11.68□□□□□ -0.54
COL4A6-205ENST00000468338 SPHK2Q9NRA0 654 aa11.68□□□□□ -0.54
COL4A6-205ENST00000468338 ANO10Q9NW15 660 aa11.68□□□□□ -0.54
COL4A6-205ENST00000468338 ZSCAN32Q9NX65 697 aa11.68□□□□□ -0.54
COL4A6-205ENST00000468338 MARK1Q9P0L2 795 aa11.68□□□□□ -0.54
COL4A6-205ENST00000468338 PCDHB11Q9Y5F2 797 aa11.68□□□□□ -0.54
COL4A6-205ENST00000468338 PCDHGA2Q9Y5H1 932 aa11.68□□□□□ -0.54
COL4A6-205ENST00000468338 GVINP1Q7Z2Y8 2422 aa11.68□□□□□ -0.54
COL4A6-205ENST00000468338 PRR23AA6NEV1 266 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 M0QYV0 167 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 DKK1O94907 266 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 ADH1CP00326 375 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 ADH5P11766 374 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 KRT5P13647 590 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 GAD2Q05329 585 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 GOLGA8FQ08AF8 430 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 GOLGA8DPQ0D2H9 430 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 PPP2R5DQ14738 602 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 NCAPHQ15003 741 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 STX1AQ16623 288 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 HSP90AA4PQ58FG1 418 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 MSANTD2Q6P1R3 559 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 ZC3H14Q6PJT7 736 aaKnown RBP11.67□□□□□ -0.54
COL4A6-205ENST00000468338 TSSK4Q6SA08 328 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 SASS6Q6UVJ0 657 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 ASCL5Q7RTU5 278 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 TMEM110Q86TL2 294 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 C12orf40Q86WS4 652 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 TMEM25Q86YD3 366 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 FAM71AQ8IYT1 594 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 SIX6OS1Q8N1H7 587 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 NKD2Q969F2 451 aaPredicted RBP11.67□□□□□ -0.54
COL4A6-205ENST00000468338 HINFPQ9BQA5 517 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 NAA15Q9BXJ9 866 aaKnown RBP11.67□□□□□ -0.54
COL4A6-205ENST00000468338 HSD3B7Q9H2F3 369 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 MARCH2Q9P0N8 246 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 DNAJC12Q9UKB3 198 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 FCF1Q9Y324 198 aaKnown RBP11.67□□□□□ -0.54
COL4A6-205ENST00000468338 R4GN57 208 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 USP34Q70CQ2 3546 aa11.67□□□□□ -0.54
COL4A6-205ENST00000468338 K7EQS6 105 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 FOXN3O00409 490 aaPredicted RBP11.66□□□□□ -0.54
COL4A6-205ENST00000468338 MED7O43513 233 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 ATG13O75143 517 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 FBXO21O94952 628 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 LETM1O95202 739 aaPredicted RBP11.66□□□□□ -0.54
COL4A6-205ENST00000468338 FYNP06241 537 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 ZNF18P17022 549 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 GNA15P30679 374 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 SLC6A11P48066 632 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 RGS7P49802 495 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 NRLP54845 237 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 MESP2Q0VG99 397 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 EFEMP1Q12805 493 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 KRT31Q15323 416 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 TRIP4Q15650 581 aaPredicted RBP11.66□□□□□ -0.54
COL4A6-205ENST00000468338 ARHGAP44Q17R89 818 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 KLHDC7AQ5VTJ3 777 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 BTBD8Q5XKL5 378 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 DENND1BQ6P3S1 775 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 BEND5Q7L4P6 421 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 APTXQ7Z2E3 356 aaKnown RBP11.66□□□□□ -0.54
COL4A6-205ENST00000468338 MIB1Q86YT6 1006 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 FAM217AQ8IXS0 508 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 WDTC1Q8N5D0 677 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 SUMF1Q8NBK3 374 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 CCDC26Q8TAB7 109 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 USP33Q8TEY7 942 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 P2RY11Q96G91 374 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 PNKPQ96T60 521 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 LHX5Q9H2C1 402 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 PLCB1Q9NQ66 1216 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 ABCC13Q9NSE7 274 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 OLA1Q9NTK5 396 aaKnown RBP11.66□□□□□ -0.54
COL4A6-205ENST00000468338 FANCLQ9NW38 375 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 CYTH4Q9UIA0 394 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 LSM7Q9UK45 103 aaKnown RBP11.66□□□□□ -0.54
COL4A6-205ENST00000468338 ZNF510Q9Y2H8 683 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 PCDHGA11Q9Y5H2 935 aa11.66□□□□□ -0.54
COL4A6-205ENST00000468338 CCDC163A0A0D9SF12 145 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 ESPNB1AK53 854 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.65□□□□□ -0.54
COL4A6-205ENST00000468338 GFRA2O00451 464 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 CACNG3O60359 315 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 GFRA3O60609 400 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 KAT7O95251 611 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 LTFP02788 710 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 IRF1P10914 325 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 LCP1P13796 627 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 UCHL3P15374 230 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 GRIA2P42262 883 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 ACADSBP45954 432 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 MYL5Q02045 173 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 TYRO3Q06418 890 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 SYT13Q7L8C5 426 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 CPXM2Q8N436 756 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 CLEC4CQ8WTT0 213 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 PLD4Q96BZ4 506 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 DCLK3Q9C098 648 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 TAB2Q9NYJ8 693 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms