RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 F5H423 210 aaPredicted RBP13.27□□□□□ -0.29
VAPB-203ENST00000463370 POC1B-GALNT4F8VUJ3 575 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 TRAPPC3O43617 180 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 FKTNO75072 461 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 CAPN15O75808 1086 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 EOMESO95936 686 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 ADRA1BP35368 520 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 ARL4AP40617 200 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 OR1G1P47890 313 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 IFRD2Q12894 506 aaPredicted RBP13.27□□□□□ -0.29
VAPB-203ENST00000463370 TUBB8Q3ZCM7 444 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 SLC45A4Q5BKX6 768 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 NLRP14Q86W24 1093 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 DBF4BQ8NFT6 615 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 UNC93B1Q9H1C4 597 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 DMAP1Q9NPF5 467 aaPredicted RBP13.27□□□□□ -0.29
VAPB-203ENST00000463370 LGALS13Q9UHV8 139 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 DSEQ9UL01 958 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 PHF24Q9UPV7 400 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.27□□□□□ -0.29
VAPB-203ENST00000463370 NDUFAB1O14561 156 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 DGKIO75912 1065 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 MAP2K2P36507 400 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 YWHAHQ04917 246 aaPredicted RBP13.27□□□□□ -0.29
VAPB-203ENST00000463370 RNASELQ05823 741 aaKnown RBP13.27□□□□□ -0.29
VAPB-203ENST00000463370 BSPRYQ5W0U4 402 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 PM20D1Q6GTS8 502 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 PYROXD1Q8WU10 500 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 MAML1Q92585 1016 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 B3GALT6Q96L58 329 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 TTC25Q96NG3 672 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 QKIQ96PU8 341 aaKnown RBP eCLIP13.27□□□□□ -0.29
VAPB-203ENST00000463370 CCT8L2Q96SF2 557 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 CEP41Q9BYV8 373 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.27□□□□□ -0.29
VAPB-203ENST00000463370 CNOT10Q9H9A5 744 aaKnown RBP13.27□□□□□ -0.29
VAPB-203ENST00000463370 ETNK1Q9HBU6 452 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 PAK5Q9P286 719 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 CHMP2BQ9UQN3 213 aa13.27□□□□□ -0.29
VAPB-203ENST00000463370 CDH16O75309 829 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 GNRH1P01148 92 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 IVLP07476 585 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 SELPP16109 830 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 ZFXP17010 805 aaPredicted RBP13.26□□□□□ -0.29
VAPB-203ENST00000463370 NR2C2P49116 596 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 CDK7P50613 346 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 DPYSQ14117 519 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 TMED2Q15363 201 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 SLC39A12Q504Y0 691 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 CEP128Q6ZU80 1094 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 RFX8Q6ZV50 586 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 FAM126BQ8IXS8 530 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 XPO6Q96QU8 1125 aaKnown RBP13.26□□□□□ -0.29
VAPB-203ENST00000463370 MLXIPLQ9NP71 852 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.26□□□□□ -0.295e-10■■■□□ 16.6
VAPB-203ENST00000463370 PCDHB8Q9UN66 801 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 TRIM17Q9Y577 477 aa13.26□□□□□ -0.29
VAPB-203ENST00000463370 TMEM120BA0PK00 339 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 CFAP69A5D8W1 941 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 CHADO15335 359 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 APRTP07741 180 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 TYMPP19971 482 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 ELK3P41970 407 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 SEMA3BQ13214 749 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 LRRC14Q15048 493 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 QPCTQ16769 361 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 EFHC2Q5JST6 749 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 SDHAF4Q5VUM1 108 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 C3orf62Q6ZUJ4 267 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 TAC4Q86UU9 113 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 CAND1Q86VP6 1230 aaKnown RBP13.25□□□□□ -0.29
VAPB-203ENST00000463370 PSTKQ8IV42 348 aaKnown RBP13.25□□□□□ -0.29
VAPB-203ENST00000463370 CDKL3Q8IVW4 592 aaPredicted RBP13.25□□□□□ -0.29
VAPB-203ENST00000463370 SRRM1Q8IYB3 904 aaKnown RBP13.25□□□□□ -0.29
VAPB-203ENST00000463370 PDIK1LQ8N165 341 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 THEM5Q8N1Q8 247 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 MGARPQ8TDB4 240 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 ZNF473Q8WTR7 871 aaKnown RBP13.25□□□□□ -0.29
VAPB-203ENST00000463370 PKNOX2Q96KN3 472 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 COLEC11Q9BWP8 271 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 STMN4Q9H169 189 aaPredicted RBP13.25□□□□□ -0.29
VAPB-203ENST00000463370 KIF9Q9HAQ2 790 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 RABGEF1Q9UJ41 708 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 FBXW11Q9UKB1 542 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 KBTBD13C9JR72 458 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 EEF2KO00418 725 aaKnown RBP13.25□□□□□ -0.29
VAPB-203ENST00000463370 ENPP3O14638 875 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 NDC80O14777 642 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 GRIA1P42261 906 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 GPR15P49685 360 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 SLC5A3P53794 718 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 TSPY1Q01534 308 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 XRCC4Q13426 336 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 MTFR1Q15390 333 aa13.25□□□□□ -0.29
VAPB-203ENST00000463370 PRMT1Q99873 361 aaKnown RBP13.25□□□□□ -0.29
VAPB-203ENST00000463370 TRIM56Q9BRZ2 755 aaKnown RBP13.25□□□□□ -0.29
VAPB-203ENST00000463370 RCOR3Q9P2K3 495 aaPredicted RBP13.25□□□□□ -0.29
VAPB-203ENST00000463370 GMNCA6NCL1 334 aa13.24□□□□□ -0.29
VAPB-203ENST00000463370 ANKRD65E5RJM6 399 aa13.24□□□□□ -0.29
VAPB-203ENST00000463370 H3BRJ5 948 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms