RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 TTC30AQ86WT1 665 aa23.05■■□□□ 1.28
CTDSPL-206ENST00000443503 SMARCD1Q96GM5 515 aa23.05■■□□□ 1.28
CTDSPL-206ENST00000443503 TRMT6Q9UJA5 497 aaKnown RBP23.05■■□□□ 1.28
CTDSPL-206ENST00000443503 CKMP06732 381 aa23.05■■□□□ 1.28
CTDSPL-206ENST00000443503 RPL22P35268 128 aaKnown RBP23.05■■□□□ 1.28
CTDSPL-206ENST00000443503 ZNF143P52747 638 aaPredicted RBP23.05■■□□□ 1.28
CTDSPL-206ENST00000443503 CDH17Q12864 832 aa23.05■■□□□ 1.28
CTDSPL-206ENST00000443503 SEL1L3Q68CR1 1132 aa23.05■■□□□ 1.28
CTDSPL-206ENST00000443503 ILDR2Q71H61 639 aa23.05■■□□□ 1.28
CTDSPL-206ENST00000443503 PLIN4Q96Q06 1357 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 FARP2O94887 1054 aaPredicted RBP23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 LTFP02788 710 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 USP17L7P0C7H9 530 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 MARC1Q5VT66 337 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 WSCD1Q658N2 575 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 APOPT1Q96IL0 206 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 GPAMQ9HCL2 828 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 DMAP1Q9NPF5 467 aaPredicted RBP23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 BATF3Q9NR55 127 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 RRN3Q9NYV6 651 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 SOAT2O75908 522 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 RPLP2P05387 115 aaKnown RBP23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 KCNA4P22459 653 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 CALB2P22676 271 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 BDNFP23560 247 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 FAM183BPQ6ZVS7 135 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 CHKAP35790 457 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 VHLP40337 213 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 STX5Q13190 355 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 USP50Q70EL3 339 aaPredicted RBP23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 APTXQ7Z2E3 356 aaKnown RBP23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 PTAR1Q7Z6K3 402 aaPredicted RBP23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 FHDC1Q9C0D6 1143 aaPredicted RBP23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 STARD7Q9NQZ5 370 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 FAM208AQ9UK61 1670 aaKnown RBP23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 TPST1O60507 370 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 UNC93AQ86WB7 457 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 ZNF75CPQ92670 426 aaPredicted RBP23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 DACT3Q96B18 629 aaPredicted RBP23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 SNRNP25Q9BV90 132 aaKnown RBP23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 POPDC2Q9HBU9 364 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 ERVK-5Q9HDB9 667 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 PDGFCQ9NRA1 345 aa23.04■■□□□ 1.28
CTDSPL-206ENST00000443503 SYTL3Q4VX76 610 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 CXCL17Q6UXB2 119 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 IQCKQ8N0W5 287 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 PCDHB8Q9UN66 801 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 LMO7Q8WWI1 1683 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 CFAP99D6REC4 459 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 GOLGA8TH3BQL2 631 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 MLH1P40692 756 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 MMRN1Q13201 1228 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 TMED1Q13445 227 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 SLC35G1Q2M3R5 365 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 C12orf29Q8N999 325 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 STX18Q9P2W9 335 aaKnown RBP23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 DRG1Q9Y295 367 aaKnown RBP23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 NRCAMQ92823 1304 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 PEX10O60683 326 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 MT-CO1P00395 513 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 OXCT1P55809 520 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 TMEM154Q6P9G4 183 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 BBS12Q6ZW61 710 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 MSL3Q8N5Y2 521 aaKnown RBP23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 RIC8BQ9NVN3 520 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 VPS9D1Q9Y2B5 631 aa23.03■■□□□ 1.28
CTDSPL-206ENST00000443503 ARHGAP10A1A4S6 786 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 TUBP50607 506 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 KCNK10P57789 538 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 PIGZQ86VD9 579 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 PKD2L2Q9NZM6 624 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 NCKIPSDQ9NZQ3 722 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 TRPM5Q9NZQ8 1165 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 PTPN4P29074 926 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 IFNA8P32881 189 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 ATN1P54259 1190 aaPredicted RBP23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 SCUBE1Q8IWY4 988 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 XPNPEP3Q9NQH7 507 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 KIF17Q9P2E2 1029 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 THRAP10827 490 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 PTPN1P18031 435 aaKnown RBP23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 HS6ST3Q8IZP7 471 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 SPATA17Q96L03 361 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 GID8Q9NWU2 228 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 ZNF862O60290 1169 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 VAPBO95292 243 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 LCA5LO95447 670 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 ALDH2P05091 517 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 UBTFL6P0CB48 400 aaPredicted RBP23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 SCNN1GP51170 649 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 ZCCHC23Q6ZST2 131 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 ART4Q93070 314 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 WNT8BQ93098 351 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 TKTL2Q9H0I9 626 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 V9GYQ6 96 aa23.02■■□□□ 1.28
CTDSPL-206ENST00000443503 MANSC4A6NHS7 340 aaPredicted RBP23.01■■□□□ 1.27
CTDSPL-206ENST00000443503 NCF1BA6NI72 391 aaPredicted RBP23.01■■□□□ 1.27
CTDSPL-206ENST00000443503 NCF1CA8MVU1 366 aaPredicted RBP23.01■■□□□ 1.27
CTDSPL-206ENST00000443503 H7C4K7 107 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms