RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 MTFR1Q15390 333 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 SMAD1Q15797 465 aaKnown RBP15.18■□□□□ 0.02
RFTN1-203ENST00000432519 TAF2Q6P1X5 1199 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 ARCQ7LC44 396 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 STRADAQ7RTN6 431 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 NT5C3BQ969T7 300 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 NPY6RQ99463 290 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 PITPNM3Q9BZ71 974 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 SENP6Q9GZR1 1112 aaPredicted RBP15.18■□□□□ 0.02
RFTN1-203ENST00000432519 SLC40A1Q9NP59 571 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 SLC12A4Q9UP95 1085 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 NUP205Q92621 2012 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 TSC2P49815 1807 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 TTC3P53804 2025 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 HNRNPH1P31943 449 aaKnown RBP15.18■□□□□ 0.02
RFTN1-203ENST00000432519 SNX16P57768 344 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 PTK7Q13308 1070 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 OLIG2Q13516 323 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 EFHC1Q5JVL4 640 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 DENND5BQ6ZUT9 1274 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 BNIPLQ7Z465 357 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 ECHDC2Q86YB7 292 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 CCDC63Q8NA47 563 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 PTPRN2Q92932 1015 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 OLFM3Q96PB7 478 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 CYTH2Q99418 400 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 LRRC4Q9HBW1 653 aa15.18■□□□□ 0.02
RFTN1-203ENST00000432519 NDC80O14777 642 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 POMCP01189 267 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 USP17L7P0C7H9 530 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 CD52P31358 61 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 SCNN1AP37088 669 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 SPARCL1Q14515 664 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 KLHL38Q2WGJ6 581 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 TIGD5Q53EQ6 642 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 SH2D5Q6ZV89 423 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 BANPQ8N9N5 519 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 SLC44A1Q8WWI5 657 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 SOCS4Q8WXH5 440 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 QKIQ96PU8 341 aaKnown RBP eCLIP15.17■□□□□ 0.02
RFTN1-203ENST00000432519 RTP3Q9BQQ7 232 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 KLC2Q9H0B6 622 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 ZC3H7BQ9UGR2 993 aaKnown RBP15.17■□□□□ 0.02
RFTN1-203ENST00000432519 TRPV2Q9Y5S1 764 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 SNX10Q9Y5X0 201 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 FAM155AB1AL88 458 aaPredicted RBP15.17■□□□□ 0.02
RFTN1-203ENST00000432519 RASSF9O75901 435 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 THP07101 528 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 GJA9P57773 515 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 CDHR3Q6ZTQ4 885 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 VSIG1Q86XK7 387 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 CTAGE3PQ8IX95 158 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 PPM1NQ8N819 430 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 RNF139Q8WU17 664 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 SIGLEC10Q96LC7 697 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 SYT15Q9BQS2 421 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 MTG1Q9BT17 334 aaPredicted RBP15.17■□□□□ 0.02
RFTN1-203ENST00000432519 CYLDQ9NQC7 956 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 SLC17A6Q9P2U8 582 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 FETUBQ9UGM5 382 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 PHTF1Q9UMS5 762 aa15.17■□□□□ 0.02
RFTN1-203ENST00000432519 SMG5Q9UPR3 1016 aaKnown RBP15.17■□□□□ 0.02
RFTN1-203ENST00000432519 DAB1O75553 588 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 GCATO75600 419 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 AP1G2O75843 785 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 DGKIO75912 1065 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 GHRP10912 638 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 BRCC3P46736 316 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 FLT3LGP49771 235 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 PDK4Q16654 411 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 UNC5AQ6ZN44 842 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 FAM35AQ86V20 835 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 SERINC5Q86VE9 423 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 SIX6OS1Q8N1H7 587 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 EDEM1Q92611 657 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 ACTR5Q9H9F9 607 aaPredicted RBP15.16■□□□□ 0.02
RFTN1-203ENST00000432519 SENP1Q9P0U3 644 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 LAMA3Q16787 3333 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 CFAP69A5D8W1 941 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 SMAPO00193 183 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 SUN1O94901 812 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 ITGB1P05556 798 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 SLC10A3P09131 477 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 FAM200BP0CF97 657 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 CSH1P0DML2 217 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 CSH2P0DML3 217 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 NOS2P35228 1153 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 RDXP35241 583 aaKnown RBP15.16■□□□□ 0.02
RFTN1-203ENST00000432519 MAGEA3P43357 314 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 MAGEA6P43360 314 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 BMPR2Q13873 1038 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 HEATR6Q6AI08 1181 aaKnown RBP15.16■□□□□ 0.02
RFTN1-203ENST00000432519 CDKL3Q8IVW4 592 aaPredicted RBP15.16■□□□□ 0.02
RFTN1-203ENST00000432519 VPS52Q8N1B4 723 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 SLC7A14Q8TBB6 771 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 TMEM209Q96SK2 561 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 ZFYVE28Q9HCC9 887 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 WDR6Q9NNW5 1121 aaKnown RBP15.16■□□□□ 0.02
RFTN1-203ENST00000432519 TMEM51Q9NW97 253 aa15.16■□□□□ 0.02
RFTN1-203ENST00000432519 TRIM33Q9UPN9 1127 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms