RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 IBSPP21815 317 aaPredicted RBP9.01□□□□□ -0.97
GABPB1-205ENST00000429662 DNAJB2P25686 324 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 VHLP40337 213 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 GPD2P43304 727 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 ATP5OP48047 213 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 GDF10P55107 478 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 CDH6P55285 790 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 PRSS12P56730 875 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 YWHAGP61981 247 aaKnown RBP eCLIP9.01□□□□□ -0.97
GABPB1-205ENST00000429662 SARNPP82979 210 aaKnown RBP9.01□□□□□ -0.97
GABPB1-205ENST00000429662 KRT81Q14533 505 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 LBRQ14739 615 aaKnown RBP9.01□□□□□ -0.97
GABPB1-205ENST00000429662 MSS51Q4VC12 460 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 SEZ6Q53EL9 994 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 C6orf163Q5TEZ5 329 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 ZNF449Q6P9G9 518 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 LCLAT1Q6UWP7 414 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 SH2D5Q6ZV89 423 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 VPS52Q8N1B4 723 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 PPFIBP2Q8ND30 876 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 BADQ92934 168 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 MCUR1Q96AQ8 359 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 SKA1Q96BD8 255 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 MRRFQ96E11 262 aaKnown RBP9.01□□□□□ -0.97
GABPB1-205ENST00000429662 CPXM1Q96SM3 734 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 C1QTNF1Q9BXJ1 281 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 CALN1Q9BXU9 219 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 SDCBP2Q9H190 292 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 SMARCAD1Q9H4L7 1026 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 STN1Q9H668 368 aaKnown RBP9.01□□□□□ -0.97
GABPB1-205ENST00000429662 TXNRD2Q9NNW7 524 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 CNTN3Q9P232 1028 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 NXF1Q9UBU9 619 aaKnown RBP9.01□□□□□ -0.97
GABPB1-205ENST00000429662 ITGA11Q9UKX5 1188 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 BARX2Q9UMQ3 279 aaPredicted RBP9.01□□□□□ -0.97
GABPB1-205ENST00000429662 CHMP2BQ9UQN3 213 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 TELO2Q9Y4R8 837 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 ZNF236Q9UL36 1845 aa9.01□□□□□ -0.97
GABPB1-205ENST00000429662 A6NHS1 94 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 C2CD4BA6NLJ0 364 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 KBTBD13C9JR72 458 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 M0QYV0 167 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 NOP56O00567 594 aaKnown RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 LCE2BO14633 110 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 PPP1R12AO14974 1030 aaPredicted RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 MDM4O15151 490 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 SMNDC1O75940 238 aaKnown RBP eCLIP9□□□□□ -0.97
GABPB1-205ENST00000429662 CBX6O95503 412 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 KRT19P08727 400 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 DLDP09622 509 aaKnown RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 SKIP12755 728 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 TPSB2P20231 275 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 EPHB2P29323 1055 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 SCNN1AP37088 669 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 PHKA2P46019 1235 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 SERPINB4P48594 390 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 NR2C2P49116 596 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 RAP1GDS1P52306 607 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 BCAR1P56945 870 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 RBP5P82980 135 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 INCA1Q0VD86 236 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 FAAP100Q0VG06 881 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 NAB1Q13506 487 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 TPSAB1Q15661 275 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 CCDC6Q16204 474 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 SMTNL2Q2TAL5 461 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 KBTBD12Q3ZCT8 623 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 DNAL1Q4LDG9 190 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 KCNT1Q5JUK3 1230 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 ZNF484Q5JVG2 852 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 CELF3Q5SZQ8 465 aaKnown RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 FAM102AQ5T9C2 384 aaPredicted RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 SLC9A4Q6AI14 798 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 CAPRIN2Q6IMN6 1127 aaKnown RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 SCARA5Q6ZMJ2 495 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 TIFABQ6ZNK6 161 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 GADL1Q6ZQY3 521 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 ARCQ7LC44 396 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 TMPRSS6Q8IU80 811 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 CCNJLQ8IV13 435 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 DHX37Q8IY37 1157 aaKnown RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 KIAA0319LQ8IZA0 1049 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 CCDC110Q8TBZ0 833 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 ACMSDQ8TDX5 336 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 DNAJC9Q8WXX5 260 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 HSPH1Q92598 858 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 STMN2Q93045 179 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 ACSF2Q96CM8 615 aaPredicted RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 OXNAD1Q96HP4 312 aaPredicted RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 HEXIM2Q96MH2 286 aaKnown RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 GPR20Q99678 358 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 LBHD1Q9BQE6 289 aaPredicted RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 WDR83Q9BRX9 315 aaKnown RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 ZNF670Q9BS34 389 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 TMEM120AQ9BXJ8 343 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 SENP6Q9GZR1 1112 aaPredicted RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 WWP1Q9H0M0 922 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 CDT1Q9H211 546 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 VCXQ9H320 206 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 DENND2DQ9H6A0 471 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms