RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 TRIM59Q8IWR1 403 aa14.29□□□□□ -0.12
RAPGEF1-204ENST00000414781 SPACA3Q8IXA5 215 aa14.29□□□□□ -0.12
RAPGEF1-204ENST00000414781 HAPLN2Q9GZV7 340 aa14.29□□□□□ -0.12
RAPGEF1-204ENST00000414781 MIR1-1HGQ9H1L0 117 aa14.29□□□□□ -0.12
RAPGEF1-204ENST00000414781 TBC1D14Q9P2M4 693 aa14.29□□□□□ -0.12
RAPGEF1-204ENST00000414781 FTSJ1Q9UET6 329 aa14.29□□□□□ -0.12
RAPGEF1-204ENST00000414781 BTBD3Q9Y2F9 522 aa14.29□□□□□ -0.12
RAPGEF1-204ENST00000414781 HELZP42694 1942 aaKnown RBP14.29□□□□□ -0.12
RAPGEF1-204ENST00000414781 LACTBL1A8MY62 500 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 PIRO00625 290 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 FAM189A1O60320 539 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 PCDHGA12O60330 932 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 C1SP09871 688 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 ATP1A3P13637 1013 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 TMPRSS3P57727 454 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 SLC7A9P82251 487 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 BNC1Q01954 994 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 GAD2Q05329 585 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 KRT31Q15323 416 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 DDR2Q16832 855 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 C10orf76Q5T2E6 689 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 SDHAF4Q5VUM1 108 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 BROXQ5VW32 411 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 TCERG1LQ5VWI1 586 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 CRELD2Q6UXH1 353 aaPredicted RBP14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 METTL3Q86U44 580 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 DDX42Q86XP3 938 aaKnown RBP eCLIP14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 NT5DC4Q86YG4 428 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 BRSK2Q8IWQ3 736 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 STKLD1Q8NE28 680 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 PARD3BQ8TEW8 1205 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 CACTINQ8WUQ7 758 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 CCDC127Q96BQ5 260 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 MED8Q96G25 268 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 TRIM5Q9C035 493 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 CD248Q9HCU0 757 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 DEC1Q9P2X7 70 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 STARD13Q9Y3M8 1113 aa14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 UBR5O95071 2799 aaPredicted RBP14.28□□□□□ -0.12
RAPGEF1-204ENST00000414781 CEP192Q8TEP8 1941 aa14.27□□□□□ -0.12
RAPGEF1-204ENST00000414781 OBSL1O75147 1896 aa14.27□□□□□ -0.12
RAPGEF1-204ENST00000414781 TSC2P49815 1807 aa14.27□□□□□ -0.12
RAPGEF1-204ENST00000414781 ANO9A1A5B4 782 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 TULP1O00294 542 aaPredicted RBP14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 PES1O00541 588 aaKnown RBP14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 AFPP02771 609 aaKnown RBP14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 ADRB2P07550 413 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 TAF6P49848 677 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 CCT8P50990 548 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 AFF3P51826 1226 aaKnown RBP14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 COPB1P53618 953 aaKnown RBP14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 CCDC173Q0VFZ6 552 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 KCNH2Q12809 1159 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 MYO1EQ12965 1108 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 DCAF17Q5H9S7 520 aaPredicted RBP14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 WSCD1Q658N2 575 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 CHPFQ8IZ52 775 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 TERB1Q8NA31 727 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 OTUB2Q96DC9 234 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 MRGPRX1Q96LB2 322 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 GABRG3Q99928 467 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 SEMA4CQ9C0C4 833 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 NDST4Q9H3R1 872 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 TMLHEQ9NVH6 421 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 NXF1Q9UBU9 619 aaKnown RBP14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 IL17BQ9UHF5 180 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 DERAQ9Y315 318 aa14.27□□□□□ -0.13
RAPGEF1-204ENST00000414781 P4HA2O15460 535 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 HOXC11O43248 304 aaPredicted RBP14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 DLATP10515 647 aaKnown RBP14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 TNNI1P19237 187 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 TNFSF9P41273 254 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 CLDN10P78369 228 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 ZXDBP98169 803 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 TEAD4Q15561 434 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 ENOX2Q16206 610 aaKnown RBP14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 DUOXA2Q1HG44 320 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 CFAP221Q4G0U5 840 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 COLEC12Q5KU26 742 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 KIAA1324Q6UXG2 1013 aaKnown RBP14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 WDR49Q8IV35 697 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 ETFBKMTQ8IXQ9 262 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 SLC35C1Q96A29 364 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 FAM212AQ96EL1 285 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 TOE1Q96GM8 510 aaKnown RBP14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 CEP295NLQ96MC4 621 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 LGMNQ99538 433 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 PCED1AQ9H1Q7 454 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 VPS16Q9H269 839 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 TAB2Q9NYJ8 693 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 WSB2Q9NYS7 404 aaPredicted RBP14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 EHD2Q9NZN4 543 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 TRPM5Q9NZQ8 1165 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 GMIPQ9P107 970 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 R3HCC1Q9Y3T6 440 aaKnown RBP14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 C2CD2Q9Y426 696 aa14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 SPTAN1Q13813 2472 aaKnown RBP14.26□□□□□ -0.13
RAPGEF1-204ENST00000414781 COL5A1P20908 1838 aaPredicted RBP14.25□□□□□ -0.13
RAPGEF1-204ENST00000414781 A0A1B0GTH6 734 aa14.25□□□□□ -0.13
RAPGEF1-204ENST00000414781 A0A1B0GVT2 93 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms