RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 CLN6Q9NWW5 311 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 ETAA1Q9NY74 926 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 UPB1Q9UBR1 384 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 CKLFQ9UBR5 152 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 C3orf18Q9UK00 162 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 GDAQ9Y2T3 454 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 STX16-NPEPL1H3BU86 382 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 STX16O14662 325 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 CHST10O43529 356 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 RHAGQ02094 409 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 NFX1Q12986 1120 aaKnown RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SNRNP35Q16560 246 aaKnown RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 WDR72Q3MJ13 1102 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 COBLL1Q53SF7 1204 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 FIGNQ5HY92 759 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 FSTL5Q8N475 847 aaPredicted RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 MINDY2Q8NBR6 621 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 OR56A4Q8NGH8 313 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 RIT2Q99578 217 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 ANAPC2Q9UJX6 822 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 CDH9Q9ULB4 789 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 PADI4Q9UM07 663 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 CAMSAP1Q5T5Y3 1602 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 PXDNLA1KZ92 1463 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 STK25O00506 426 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 UCHL3P15374 230 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SLC26A3P40879 764 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SCRN3Q0VDG4 424 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 FEZF2Q8TBJ5 459 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 APOL5Q9BWW9 433 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 REXO4Q9GZR2 422 aaKnown RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 ZSWIM5Q9P217 1185 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 TRHDEQ9UKU6 1024 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SIK3Q9Y2K2 1263 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SPATA31A3Q5VYP0 1347 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 HACD1B0YJ81 288 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 RPS6KA4O75676 772 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SLC25A27O95847 323 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 COILP38432 576 aaPredicted RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 ITGA8P53708 1063 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 PTPRNQ16849 979 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 PYHIN1Q6K0P9 492 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 CLHC1Q8NHS4 586 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 ZNF669Q96BR6 464 aaPredicted RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 COX4I2Q96KJ9 171 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 CPNE1Q99829 537 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 NLRP1Q9C000 1473 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 KPNA6O60684 536 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 ATP1A3P13637 1013 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 MYL9P24844 172 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 HNRNPH1P31943 449 aaKnown RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 ZNF177Q13360 481 aaPredicted RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 RPTNQ6XPR3 784 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 AGMOQ6ZNB7 445 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 MTSS1LQ765P7 747 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 MCEEQ96PE7 176 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 ZSWIM1Q9BR11 485 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 REEP1Q9H902 201 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 A0A1W2PQ72 361 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 SRGAP2O75044 1071 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 HIST1H2ABP04908 130 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 PSMB9P28065 219 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ADARP55265 1226 aaKnown RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 IL5RAQ01344 420 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 EFR3AQ14156 821 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ACAP1Q15027 740 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ZNHIT3Q15649 155 aaPredicted RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 TBCELQ5QJ74 424 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 HIST3H2AQ7L7L0 130 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ANKS1AQ92625 1134 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 HIST1H2ACQ93077 130 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ZNF512Q96ME7 567 aaPredicted RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 MLXIPLQ9NP71 852 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ERGIC3Q9Y282 383 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ACTL7BQ9Y614 415 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 SMCO3A2RU48 225 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 USP17L15C9J2P7 530 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 USP17L13C9JLJ4 530 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 USP17L11C9JVI0 530 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 USP17L18D6R9N7 530 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 USP17L22D6RA61 530 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 USP17L17D6RBQ6 530 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 USP17L19D6RCP7 530 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 USP17L20D6RJB6 530 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 F5H5T6 163 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 PSMD11O00231 422 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 KMOO15229 486 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ZNF682O95780 498 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 HSMCR30P0CW71 290 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 RBP3P10745 1247 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 POLR2EP19388 210 aaKnown RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 GSTM5P46439 218 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 HSF2Q03933 536 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 USP17L24Q0WX57 530 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 LONRF1Q17RB8 773 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 TYSND1Q2T9J0 566 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 STRIP1Q5VSL9 837 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 MOXD1Q6UVY6 613 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms