RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 ANTXR2P58335 489 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 SMARCB1Q12824 385 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 DDR2Q16832 855 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 GDF7Q7Z4P5 450 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 NOP9Q86U38 636 aaKnown RBP7.46□□□□□ -1.22
UBE2F-204ENST00000409953 TP53INP2Q8IXH6 220 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 C4orf19Q8IY42 314 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 CXorf38Q8TB03 319 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 IFI44Q8TCB0 444 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 MYRFLQ96LU7 910 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 LHX5Q9H2C1 402 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 TTC12Q9H892 705 aaPredicted RBP7.46□□□□□ -1.22
UBE2F-204ENST00000409953 ERVMER34-1Q9H9K5 563 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 C6orf50Q9HD87 102 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 TBC1D14Q9P2M4 693 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 PPM1HQ9ULR3 514 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 PCDHB11Q9Y5F2 797 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 SHANK1Q9Y566 2161 aa7.46□□□□□ -1.22
UBE2F-204ENST00000409953 HEATR9A2RTY3 570 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 TMEM200CA6NKL6 621 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 EFCAB7A8K855 629 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 TLR4O00206 839 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 SH2B2O14492 632 aaPredicted RBP7.45□□□□□ -1.22
UBE2F-204ENST00000409953 WNT9AO14904 365 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 WIPF1O43516 503 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 EDIL3O43854 480 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 DGAT1O75907 488 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 FBXO45P0C2W1 286 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 ODC1P11926 461 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 ZNF132P52740 706 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 PDX1P52945 283 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 SLC7A9P82251 487 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 KIAA0895LQ68EN5 471 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 SP5Q6BEB4 398 aaPredicted RBP7.45□□□□□ -1.22
UBE2F-204ENST00000409953 LRRTM3Q86VH5 581 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 ZFAND4Q86XD8 727 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 TMEM25Q86YD3 366 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 SLC25A45Q8N413 288 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 ZNF276Q8N554 614 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 APOLD1Q96LR9 279 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 C2orf40Q9H1Z8 148 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 SPHK2Q9NRA0 654 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 DDX19BQ9UMR2 479 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 SLC5A6Q9Y289 635 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 COMMD10Q9Y6G5 202 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 TACC2O95359 2948 aa7.45□□□□□ -1.22
UBE2F-204ENST00000409953 LY6G6EA0A0G2JKS1 128 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 CCDC69A6NI79 296 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 POM121CA8CG34 1229 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 NEDD8-MDP1E9PL57 170 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 CD99P14209 185 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 HGFP14210 728 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 ZNF16P17020 682 aaPredicted RBP7.44□□□□□ -1.22
UBE2F-204ENST00000409953 PFKLP17858 780 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 UGT1A5P35504 534 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 SAFBQ15424 915 aaKnown RBP eCLIP7.44□□□□□ -1.22
UBE2F-204ENST00000409953 C4orf48Q5BLP8 95 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 MAEAQ7L5Y9 396 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 DDX42Q86XP3 938 aaKnown RBP eCLIP7.44□□□□□ -1.22
UBE2F-204ENST00000409953 SPATS2Q86XZ4 545 aaKnown RBP7.44□□□□□ -1.22
UBE2F-204ENST00000409953 FBXO39Q8N4B4 442 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 OTUB2Q96DC9 234 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 TRIM44Q96DX7 344 aaPredicted RBP7.44□□□□□ -1.22
UBE2F-204ENST00000409953 CATSPER2Q96P56 530 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 NACC1Q96RE7 527 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 TSPAN18Q96SJ8 248 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 C1QTNF2Q9BXJ5 285 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 RNF38Q9H0F5 515 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 CCDC113Q9H0I3 377 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 CDT1Q9H211 546 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 DCTPP1Q9H773 170 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 EBF2Q9HAK2 575 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 CBX8Q9HC52 389 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 CYLDQ9NQC7 956 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 LATS2Q9NRM7 1088 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 RGL1Q9NZL6 768 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 PCDHB5Q9Y5E4 795 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 U3KQA8 63 aa7.44□□□□□ -1.22
UBE2F-204ENST00000409953 ZNF106Q9H2Y7 1883 aaKnown RBP7.43□□□□□ -1.22
UBE2F-204ENST00000409953 FAM47DPA6NHR8 397 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 KIAA1324LA8MWY0 1029 aaPredicted RBP7.43□□□□□ -1.22
UBE2F-204ENST00000409953 TCP11X1B4DZS4 312 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 NVLO15381 856 aaKnown RBP7.43□□□□□ -1.22
UBE2F-204ENST00000409953 CACNG3O60359 315 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 USO1O60763 962 aaKnown RBP7.43□□□□□ -1.22
UBE2F-204ENST00000409953 TCEA3O75764 348 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 CNTN5O94779 1100 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 TDP2O95551 362 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 CD1EP15812 388 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 VARSP26640 1264 aaKnown RBP7.43□□□□□ -1.22
UBE2F-204ENST00000409953 LRPAP1P30533 357 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 CDH8P55286 799 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 ENPP2Q13822 863 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 CTTNQ14247 550 aaKnown RBP7.43□□□□□ -1.22
UBE2F-204ENST00000409953 SETDB1Q15047 1291 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 ZNF568Q3ZCX4 644 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 Q4G0T1 1027 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 SLC45A4Q5BKX6 768 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 NT5DC1Q5TFE4 455 aa7.43□□□□□ -1.22
UBE2F-204ENST00000409953 CRTC1Q6UUV9 634 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms