RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CLSTN3Q9BQT9 956 aa5.73□□□□□ -1.49
EPHA4-202ENST00000409854 DPH5Q9H2P9 285 aa5.73□□□□□ -1.49
EPHA4-202ENST00000409854 DHX35Q9H5Z1 703 aaKnown RBP5.73□□□□□ -1.49
EPHA4-202ENST00000409854 NMUR1Q9HB89 426 aa5.73□□□□□ -1.49
EPHA4-202ENST00000409854 ANLNQ9NQW6 1124 aa5.73□□□□□ -1.49
EPHA4-202ENST00000409854 ARHGEF38Q9NXL2 777 aa5.73□□□□□ -1.49
EPHA4-202ENST00000409854 SPG21Q9NZD8 308 aa5.73□□□□□ -1.49
EPHA4-202ENST00000409854 CWC15Q9P013 229 aaKnown RBP5.73□□□□□ -1.49
EPHA4-202ENST00000409854 HPCAL4Q9UM19 191 aa5.73□□□□□ -1.49
EPHA4-202ENST00000409854 SHROOM3Q8TF72 1996 aa5.73□□□□□ -1.49
EPHA4-202ENST00000409854 FGBP02675 491 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 ZFXP17010 805 aaPredicted RBP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 ATF6P18850 670 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 PPM1AP35813 382 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 USP46P62068 366 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 RPL10AP62906 217 aaKnown RBP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 DYNLT1P63172 113 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 DPYSQ14117 519 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 PPP1R7Q15435 360 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 EFHC2Q5JST6 749 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 BRMS1LQ5PSV4 323 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 TMEM240Q5SV17 173 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 ARTNQ5T4W7 220 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 TPGS2Q68CL5 300 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 PSRC1Q6PGN9 363 aaPredicted RBP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 SND1Q7KZF4 910 aaKnown RBP eCLIP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 ZNF276Q8N554 614 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 CCDC89Q8N998 374 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 EDEM1Q92611 657 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 BADQ92934 168 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 CLP1Q92989 425 aaKnown RBP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 RTP4Q96DX8 246 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 SNF8Q96H20 258 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 CCDC114Q96M63 670 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 MAK16Q9BXY0 300 aaKnown RBP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 MAGEB5Q9BZ81 275 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 FAM204AQ9H8W3 233 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 PCDH9Q9HC56 1237 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 DDIT4Q9NX09 232 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 OSER1Q9NX31 292 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 CLIC5Q9NZA1 410 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 AFF4Q9UHB7 1163 aaKnown RBP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 SNX24Q9Y343 169 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 A0A1W2PQH9 124 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 LILRB3O75022 631 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 PPFIA2O75334 1257 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 KRT14P02533 472 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 ITIH2P19823 946 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 NR2C2P49116 596 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 NME3Q13232 169 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 XRCC4Q13426 336 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 PPP2R5DQ14738 602 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 KCTD19Q17RG1 926 aaPredicted RBP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 BTBD8Q5XKL5 378 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 NCBP2-AS2Q69YL0 99 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 DENND5BQ6ZUT9 1274 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 ZNF365Q70YC5 407 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 OTOP2Q7RTS6 562 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 TMC3Q7Z5M5 1100 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 PYROXD2Q8N2H3 581 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 TSEN2Q8NCE0 465 aaKnown RBP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 FBXO25Q8TCJ0 367 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 RNF139Q8WU17 664 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 HERVK_113Q902F9 699 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 HAUS1Q96CS2 278 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 TMEM169Q96HH4 297 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 OLFM3Q96PB7 478 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 OSBPL2Q9H1P3 480 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 TMPRSS4Q9NRS4 437 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 FNIP2Q9P278 1114 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 SAE1Q9UBE0 346 aaPredicted RBP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 MAFFQ9ULX9 164 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 NEU3Q9UQ49 428 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 H3BRJ5 948 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 MCF2LO15068 1137 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 GOT1P17174 413 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 YWHAQP27348 245 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 ARL4AP40617 200 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 EIF3EP60228 445 aaKnown RBP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 NRG1Q02297 640 aaPredicted RBP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 CAV1Q03135 178 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 RAB33AQ14088 237 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 HLTFQ14527 1009 aaKnown RBP eCLIP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 PAFAH1B3Q15102 231 aaKnown RBP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 ARL13BQ3SXY8 428 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 PPP6R3Q5H9R7 873 aaPredicted RBP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 SDHAF4Q5VUM1 108 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 SNX30Q5VWJ9 437 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 NPNTQ6UXI9 565 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 GLIS1Q8NBF1 620 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 BBOF1Q8ND07 529 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 ZNF461Q8TAF7 563 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 ADAM32Q8TC27 787 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.72□□□□□ -1.49
EPHA4-202ENST00000409854 OVCA2Q8WZ82 227 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 P3H4Q92791 437 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 CASP10Q92851 521 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 YME1L1Q96TA2 773 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 FMO2Q99518 471 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms