RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 H0YCG3 227 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 STRNO43815 780 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 BPGMP07738 259 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 ATP6V1B1P15313 513 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 YWHAZP63104 245 aaKnown RBP24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 SNAPC2Q13487 334 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 TUBB3Q13509 450 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 PEX6Q13608 980 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 POTEAQ6S8J7 498 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 TMEM192Q8IY95 271 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 UNC5BQ8IZJ1 945 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 RDM1Q8NG50 284 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 ACTRT2Q8TDY3 377 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 GMLQ99445 158 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 XAB2Q9HCS7 855 aaKnown RBP24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 TTLL3Q9Y4R7 772 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 COL4A5P29400 1685 aa24.78■■□□□ 1.56
CSNK1E-203ENST00000396832 TBC1D12O60347 775 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 CSDE1O75534 798 aaKnown RBP24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 CSH1P0DML2 217 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 CSH2P0DML3 217 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 PPP1R2P3Q6NXS1 205 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 BRSK2Q8IWQ3 736 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 THAP1Q9NVV9 213 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 SSX2IPQ9Y2D8 614 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 H3BNX3 289 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 SPAG6O75602 509 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 TOM1L1O75674 476 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 KLHL2O95198 593 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 C1QAP02745 245 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 ALDH1A3P47895 512 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 HMGCS2P54868 508 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 C16orf46Q6P387 395 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 POLNQ7Z5Q5 900 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 WDR75Q8IWA0 830 aaKnown RBP24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 NIPA2Q8N8Q9 360 aa24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.77■■□□□ 1.56
CSNK1E-203ENST00000396832 DENRO43583 198 aaKnown RBP24.76■■□□□ 1.56
CSNK1E-203ENST00000396832 EIF4BP23588 611 aaKnown RBP24.76■■□□□ 1.56
CSNK1E-203ENST00000396832 GHRHRQ02643 423 aa24.76■■□□□ 1.56
CSNK1E-203ENST00000396832 TMED1Q13445 227 aa24.76■■□□□ 1.56
CSNK1E-203ENST00000396832 MYLK3Q32MK0 819 aa24.76■■□□□ 1.56
CSNK1E-203ENST00000396832 LGSNQ5TDP6 509 aa24.76■■□□□ 1.56
CSNK1E-203ENST00000396832 XYLT1Q86Y38 959 aa24.76■■□□□ 1.56
CSNK1E-203ENST00000396832 DEFB107AQ8IZN7 70 aa24.76■■□□□ 1.56
CSNK1E-203ENST00000396832 MPP5Q8N3R9 675 aa24.76■■□□□ 1.56
CSNK1E-203ENST00000396832 NETO2Q8NC67 525 aa24.76■■□□□ 1.56
CSNK1E-203ENST00000396832 PRPF31Q8WWY3 499 aaKnown RBP24.76■■□□□ 1.56
CSNK1E-203ENST00000396832 RBM38Q9H0Z9 239 aaKnown RBP24.76■■□□□ 1.56
CSNK1E-203ENST00000396832 APOBEC2Q9Y235 224 aaKnown RBP24.76■■□□□ 1.56
CSNK1E-203ENST00000396832 CNTN2Q02246 1040 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 BTKQ06187 659 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 HSP90AA5PQ58FG0 334 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 OGFRL1Q5TC84 451 aaPredicted RBP24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 TRIM50Q86XT4 487 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 RTKN2Q8IZC4 609 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 NDUFAF2Q8N183 169 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 PPP1R14CQ8TAE6 165 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 IRGQQ8WZA9 623 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 FRMD8P1Q9BZ68 369 aaPredicted RBP24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 DHX33Q9H6R0 707 aaKnown RBP24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 BLOC1S6Q9UL45 172 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 SF3B1O75533 1304 aaKnown RBP eCLIP24.76■■□□□ 1.552e-6■■■■■ 43.1
CSNK1E-203ENST00000396832 COL11A1P12107 1806 aaPredicted RBP24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 M0QYV0 167 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 DKC1O60832 514 aaKnown RBP eCLIP24.76■■□□□ 1.554e-10■□□□□ 9.2
CSNK1E-203ENST00000396832 DNAJA2O60884 412 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 RBL1P28749 1068 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 GALK1P51570 392 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 RAB3IL1Q8TBN0 382 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 ITGA11Q9UKX5 1188 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 EFR3BQ9Y2G0 817 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 PCDHGA4Q9Y5G9 962 aa24.76■■□□□ 1.55
CSNK1E-203ENST00000396832 SIN3BO75182 1162 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 F7P08709 466 aaPredicted RBP24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 KCNJ11Q14654 390 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 DUOXA2Q1HG44 320 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 KBTBD6Q86V97 674 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 DCUN1D1Q96GG9 259 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 PNPLA8Q9NP80 782 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 TIMMDC1Q9NPL8 285 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 DNAJC16Q9Y2G8 782 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 B4GALT5O43286 388 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 ARL2P36404 184 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 GRIA1P42261 906 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 WDR49Q8IV35 697 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 MAP7D3Q8IWC1 876 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 CEP70Q8NHQ1 597 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 GAB3Q8WWW8 586 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 ZNF778Q96MU6 729 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 ADPGKQ9BRR6 497 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 ZNF180Q9UJW8 692 aa24.75■■□□□ 1.55
CSNK1E-203ENST00000396832 LOC100653049A0A140TA62 436 aa24.74■■□□□ 1.55
CSNK1E-203ENST00000396832 ITM2AO43736 263 aa24.74■■□□□ 1.55
CSNK1E-203ENST00000396832 KRT34O76011 436 aa24.74■■□□□ 1.55
CSNK1E-203ENST00000396832 PCSK6P29122 969 aa24.74■■□□□ 1.55
CSNK1E-203ENST00000396832 CRADDP78560 199 aa24.74■■□□□ 1.55
CSNK1E-203ENST00000396832 DEFB132Q7Z7B7 95 aa24.74■■□□□ 1.55
CSNK1E-203ENST00000396832 RSPH3Q86UC2 560 aa24.74■■□□□ 1.55
CSNK1E-203ENST00000396832 RNF149Q8NC42 400 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms