RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 IL12AP29459 219 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 CCND2P30279 289 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 BMXP51813 675 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 HNRNPDQ14103 355 aaKnown RBP7.84□□□□□ -1.15
VTI1A-201ENST00000393077 TAF5Q15542 800 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 NFE2Q16621 373 aaPredicted RBP7.84□□□□□ -1.15
VTI1A-201ENST00000393077 C5orf22Q49AR2 442 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 AASDHQ4L235 1098 aaPredicted RBP7.84□□□□□ -1.15
VTI1A-201ENST00000393077 LRRC8EQ6NSJ5 796 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 PAOXQ6QHF9 649 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 NEK8Q86SG6 692 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 TXNRD3Q86VQ6 643 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 DCP2Q8IU60 420 aaKnown RBP7.84□□□□□ -1.15
VTI1A-201ENST00000393077 GALNT12Q8IXK2 581 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 ATG4AQ8WYN0 398 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 MAGED4Q96JG8 741 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 ZNF560Q96MR9 790 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 ZFYVE28Q9HCC9 887 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 RAB20Q9NX57 234 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 UBA2Q9UBT2 640 aaPredicted RBP7.84□□□□□ -1.15
VTI1A-201ENST00000393077 EBF1Q9UH73 591 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 ZNHIT2Q9UHR6 403 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 DGKBQ9Y6T7 804 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 ABCB11O95342 1321 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 A0A1W2PRG6 482 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 TNFRSF21O75509 655 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 SEC24AO95486 1093 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 NPR1P16066 1061 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 ZNF182P17025 639 aaPredicted RBP7.84□□□□□ -1.15
VTI1A-201ENST00000393077 PTK7Q13308 1070 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 UBAP2LQ14157 1087 aaKnown RBP7.84□□□□□ -1.15
VTI1A-201ENST00000393077 SLC27A3Q5K4L6 730 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 USP17L2Q6R6M4 530 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 USP43Q70EL4 1123 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 C16orf62Q7Z3J2 963 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 GPBP1Q86WP2 473 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 PCYOX1LQ8NBM8 494 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 NSUN4Q96CB9 384 aaKnown RBP7.84□□□□□ -1.15
VTI1A-201ENST00000393077 DMRTB1Q96MA1 342 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 OR2B2Q9GZK3 357 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 EMILIN3Q9NT22 766 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 FBXO28Q9NVF7 368 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 SERPINB13Q9UIV8 391 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 DNAJC12Q9UKB3 198 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 ADAMTS6Q9UKP5 1117 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 TMCC3Q9ULS5 477 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 CNTNAP4Q9C0A0 1308 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 PABPN1LA6NDY0 278 aaKnown RBP7.84□□□□□ -1.15
VTI1A-201ENST00000393077 RBAK-RBAKDNI3L0D1 243 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 TK2O00142 265 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 WNT7AO00755 349 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 PRPF4O43172 522 aaKnown RBP eCLIP7.84□□□□□ -1.15
VTI1A-201ENST00000393077 PSTPIP1O43586 416 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 TPST1O60507 370 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 DNAJA2O60884 412 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 CES1P23141 567 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 CLK1P49759 484 aaKnown RBP7.84□□□□□ -1.15
VTI1A-201ENST00000393077 KCNA1Q09470 495 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 CALCRLQ16602 461 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 CCDC14Q49A88 953 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 FAM47CQ5HY64 1035 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 ATAD3BQ5T9A4 648 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 IQSEC1Q6DN90 963 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 TMEM26Q6ZUK4 368 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 SLC22A16Q86VW1 577 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 FBXL16Q8N461 479 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 LZTR1Q8N653 840 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 SLC15A4Q8N697 577 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 SGF29Q96ES7 293 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 HES6Q96HZ4 224 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 CDRT15Q96T59 188 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 GRHL1Q9NZI5 618 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 COQ3Q9NZJ6 369 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 CDH22Q9UJ99 828 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 SORCS3Q9UPU3 1222 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 POMPQ9Y244 141 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 BTBD3Q9Y2F9 522 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 MYH6P13533 1939 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 MAGEB16A2A368 324 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 C12orf71A8MTZ7 269 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 PDPK1O15530 556 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 DENRO43583 198 aaKnown RBP7.84□□□□□ -1.16
VTI1A-201ENST00000393077 GPC4O75487 556 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 WBP4O75554 376 aaKnown RBP7.84□□□□□ -1.16
VTI1A-201ENST00000393077 CHRNA5P30532 468 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 NT5C2P49902 561 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 ARSEP51690 589 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 TYSND1Q2T9J0 566 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 AADACL2Q6P093 401 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 KRT25Q7Z3Z0 450 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 SLCO6A1Q86UG4 719 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 NIM1KQ8IY84 436 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 SYTL1Q8IYJ3 562 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 LSM14AQ8ND56 463 aaKnown RBP7.84□□□□□ -1.16
VTI1A-201ENST00000393077 BHLHE22Q8NFJ8 381 aaPredicted RBP7.84□□□□□ -1.16
VTI1A-201ENST00000393077 BPIFB6Q8NFQ5 453 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 NPLOC4Q8TAT6 608 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 ZNF564Q8TBZ8 553 aaPredicted RBP7.84□□□□□ -1.16
VTI1A-201ENST00000393077 PIK3R3Q92569 461 aa7.84□□□□□ -1.16
VTI1A-201ENST00000393077 USP13Q92995 863 aaPredicted RBP7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms