RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 ABHD10Q9NUJ1 306 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 TXLNGQ9NUQ3 528 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ASNSD1Q9NWL6 643 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 DDX56Q9NY93 547 aaKnown RBP3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ZIM2Q9NZV7 527 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 RGS17Q9UGC6 210 aaPredicted RBP3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 AGO2Q9UKV8 859 aaKnown RBP3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 VPS4AQ9UN37 437 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 L1RE1Q9UN81 338 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 NOP58Q9Y2X3 529 aaKnown RBP3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 PCDHB2Q9Y5E7 798 aa3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 HEMK1Q9Y5R4 338 aaPredicted RBP3.02□□□□□ -1.93
RNU6-1040P-201ENST00000383974 A6NNZ2 444 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 PRYO14603 147 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ATG13O75143 517 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 TFEBP19484 476 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 BTF3P20290 206 aaKnown RBP3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 TBXAS1P24557 533 aaPredicted RBP3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 HOXA11P31270 313 aaPredicted RBP3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 POLD2P49005 469 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 FMO1Q01740 532 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ACOX1Q15067 660 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 SESTD1Q86VW0 696 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 RFX6Q8HWS3 928 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ADGRF4Q8IZF3 695 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 FBXL14Q8N1E6 418 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 STAG1Q8WVM7 1258 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 FAM84BQ96KN1 310 aaPredicted RBP3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 MEIS3Q99687 375 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 RNF26Q9BY78 433 aaPredicted RBP3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 RBM38Q9H0Z9 239 aaKnown RBP3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 MYLK2Q9H1R3 596 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 TYW1Q9NV66 732 aaKnown RBP3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 MDFICQ9P1T7 246 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ANAPC4Q9UJX5 808 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 OGDHLQ9ULD0 1010 aa3.01□□□□□ -1.93
RNU6-1040P-201ENST00000383974 IFITM10A6NMD0 228 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 H0YGN5 161 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 SPTLC2O15270 562 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 IBSPP21815 317 aaPredicted RBP3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 NDUFS1P28331 727 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 PBX1P40424 430 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 SOX2P48431 317 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 GAB1Q13480 694 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 FHL3Q13643 280 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 SMTNL2Q2TAL5 461 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 KRTAP27-1Q3LI81 207 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 TTLL5Q6EMB2 1281 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 TRAPPC11Q7Z392 1133 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 SPATA2LQ8IUW3 424 aaPredicted RBP3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 UEVLDQ8IX04 471 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 SUN3Q8TAQ9 357 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 IPCEF1Q8WWN9 437 aaPredicted RBP3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 LRTOMTQ8WZ04 291 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 AKAP1Q92667 903 aaKnown RBP eCLIP3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 NEUROG1Q92886 237 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ATP2A3Q93084 1043 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 LMLNQ96KR4 655 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 FAM227BQ96M60 508 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 PIMREGQ9BSJ6 248 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 LRRC27Q9C0I9 530 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 SLC25A32Q9H2D1 315 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 AS3MTQ9HBK9 375 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ZNF287Q9HBT7 754 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ZNF212Q9UDV6 495 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 CAPN11Q9UMQ6 739 aa3□□□□□ -1.93
RNU6-1040P-201ENST00000383974 KIR2DS5A0A0G2JLQ3 304 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 A6NNC1 897 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 KIR2DS3K7RE56 304 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 TNFRSF13BO14836 293 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 MAP4K4O95819 1239 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 SLC3A2P08195 630 aaKnown RBP2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 PDGFRBP09619 1106 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 MYF5P13349 255 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 DUSP1P28562 367 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 HOXD12P35452 270 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 DGKQP52824 942 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 CACNB3P54284 484 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 KCNJ12Q14500 433 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 POLD3Q15054 466 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 DLGAP5Q15398 846 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 CAPRIN2Q6IMN6 1127 aaKnown RBP2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 CELF1Q92879 486 aaKnown RBP2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 EME1Q96AY2 570 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 SENP7Q9BQF6 1050 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 NTPCRQ9BSD7 190 aaKnown RBP2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 TTLL2Q9BWV7 592 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 AAMDCQ9H7C9 122 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 FAM204AQ9H8W3 233 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 FZD3Q9NPG1 666 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 PCDHA7Q9UN72 937 aa2.99□□□□□ -1.93
RNU6-1040P-201ENST00000383974 ZNF335Q9H4Z2 1342 aaPredicted RBP2.98□□□□□ -1.93
RNU6-1040P-201ENST00000383974 TRIP12Q14669 1992 aaPredicted RBP2.98□□□□□ -1.93
RNU6-1040P-201ENST00000383974 PRPF4O43172 522 aaKnown RBP eCLIP2.98□□□□□ -1.93
RNU6-1040P-201ENST00000383974 CBFA2T3O75081 653 aa2.98□□□□□ -1.93
RNU6-1040P-201ENST00000383974 MT-ND5P03915 603 aa2.98□□□□□ -1.93
RNU6-1040P-201ENST00000383974 CHRNB1P11230 501 aa2.98□□□□□ -1.93
RNU6-1040P-201ENST00000383974 FGF3P11487 239 aaPredicted RBP2.98□□□□□ -1.93
RNU6-1040P-201ENST00000383974 DRD1P21728 446 aa2.98□□□□□ -1.93
RNU6-1040P-201ENST00000383974 EPHB1P54762 984 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms