RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 BBS2Q9BXC9 721 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 WWP1Q9H0M0 922 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 RSAD1Q9HA92 442 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 ZFP14Q9HCL3 533 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 UCKL1Q9NWZ5 548 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 DDX20Q9UHI6 824 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 AGO2Q9UKV8 859 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 PCDHA7Q9UN72 937 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 MRPS7Q9Y2R9 242 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 AP4S1Q9Y587 144 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 NR2F2P24468 414 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 TMEM62Q0P6H9 643 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 SMARCB1Q12824 385 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 LRRC36Q1X8D7 754 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 SWT1Q5T5J6 900 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 PLPP4Q5VZY2 271 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 KRT39Q6A163 491 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 AKAP1Q92667 903 aaKnown RBP eCLIP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 MRPL1Q9BYD6 325 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 LATS2Q9NRM7 1088 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 COQ3Q9NZJ6 369 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 ZMAT5Q9UDW3 170 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 VPS28Q9UK41 221 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 PHTF1Q9UMS5 762 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 TMX2Q9Y320 296 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 PCDHA5Q9Y5H7 936 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 MAGEA13PA6NCF6 341 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 A6NCN8 305 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 EIF2S1P05198 315 aaKnown RBP8.86□□□□□ -0.99
SYNE1-206ENST00000367253 CYP2C8P10632 490 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 PSMA2P25787 234 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 RCVRNP35243 200 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 USP11P51784 963 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 SP2Q02086 613 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 KPNB1Q14974 876 aaKnown RBP8.86□□□□□ -0.99
SYNE1-206ENST00000367253 KLHL38Q2WGJ6 581 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 LRRC20Q8TCA0 184 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 EME1Q96AY2 570 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 DYNLL2Q96FJ2 89 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 PHF20Q9BVI0 1012 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 ATP13A3Q9H7F0 1226 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 CYP26B1Q9NR63 512 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 INTS7Q9NVH2 962 aaKnown RBP8.86□□□□□ -0.99
SYNE1-206ENST00000367253 AIPL1Q9NZN9 384 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 BFARQ9NZS9 450 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 GULP1Q9UBP9 304 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 KLF15Q9UIH9 416 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 SOWAHDA6NJG2 315 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 PLA2G4BP0C869 781 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 CAV1Q03135 178 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 RBPJQ06330 500 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 TRIM28Q13263 835 aaKnown RBP8.86□□□□□ -0.99
SYNE1-206ENST00000367253 CUL4AQ13619 759 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 PCBP1Q15365 356 aaKnown RBP eCLIP8.86□□□□□ -0.99
SYNE1-206ENST00000367253 LRRC8EQ6NSJ5 796 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 TRIM72Q6ZMU5 477 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 OTOP2Q7RTS6 562 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 VSTM4Q8IW00 320 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 MTERF3Q96E29 417 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 DHRS1Q96LJ7 313 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 SLC9A7Q96T83 725 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 MYL10Q9BUA6 226 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 APOL5Q9BWW9 433 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 EXOSC4Q9NPD3 245 aaKnown RBP8.86□□□□□ -0.99
SYNE1-206ENST00000367253 NWD1Q149M9 1564 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 E2F8A0AVK6 867 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 HEATR9A2RTY3 570 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 TMX2-CTNND1H3BSU7 103 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 LGR5O75473 907 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 ANXA6P08133 673 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 ATF6P18850 670 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 NDUFA8P51970 172 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 ARL4CP56559 192 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 TAP1Q03518 808 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 KRT31Q15323 416 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 ADRM1Q16186 407 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 PLA2G4EQ3MJ16 856 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 CCDC58Q4VC31 144 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 EFHC1Q5JVL4 640 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 DRAXINQ8NBI3 349 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-206ENST00000367253 HPS1Q92902 700 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 FAM122AQ96E09 287 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 SAYSD1Q9NPB0 183 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 COMMD8Q9NX08 183 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 ZMYM6O95789 1325 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 RAB19A4D1S5 217 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 PFKFB2O60825 505 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 F9P00740 461 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 FYNP06241 537 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 JMJD7P0C870 316 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 SLC9A1P19634 815 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 RTP1P59025 263 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 BTN3A2P78410 334 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 NME3Q13232 169 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 TRIP13Q15645 432 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-206ENST00000367253 MAN2A1Q16706 1144 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 ATF7IP2Q5U623 682 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 PTRHD1Q6GMV3 140 aaKnown RBP8.86□□□□□ -0.99
SYNE1-206ENST00000367253 CENPPQ6IPU0 288 aa8.86□□□□□ -0.99
SYNE1-206ENST00000367253 CDC42EP5Q6NZY7 148 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms