RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 RNF181Q9P0P0 153 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 CPSF3Q9UKF6 684 aaKnown RBP14.3□□□□□ -0.12
COL6A1-201ENST00000361866 KDM3BQ7LBC6 1761 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 IGKV6D-41A0A0C4DH26 115 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 TRIM13O60858 407 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 POU5F1Q01860 360 aaKnown RBP14.3□□□□□ -0.12
COL6A1-201ENST00000361866 CCDC15Q0P6D6 951 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 FSTL1Q12841 308 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 PDK3Q15120 406 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 FUT11Q495W5 492 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 RNASEH2BQ5TBB1 312 aaKnown RBP14.3□□□□□ -0.12
COL6A1-201ENST00000361866 PLEKHA7Q6IQ23 1121 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 ANO7Q6IWH7 933 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 XRRA1Q6P2D8 792 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 HPS6Q86YV9 775 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 CLEC4FQ8N1N0 589 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 TTC39CQ8N584 583 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 APPL2Q8NEU8 664 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 L3MBTL3Q96JM7 780 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-201ENST00000361866 SMARCAD1Q9H4L7 1026 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 CCDC167Q9P0B6 97 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 UBIAD1Q9Y5Z9 338 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 CAPN8A6NHC0 703 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 VWA5AO00534 786 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 WFS1O76024 890 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 NCKAP1LP55160 1127 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 STILQ15468 1287 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 FAM83EQ2M2I3 478 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 LRRC38Q5VT99 294 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 MAB21L3Q8N8X9 362 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 P2RX7Q99572 595 aaKnown RBP14.29□□□□□ -0.12
COL6A1-201ENST00000361866 LRRC40Q9H9A6 602 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 SPON1Q9HCB6 807 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 NDUFA13Q9P0J0 144 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 SNX5Q9Y5X3 404 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 BNIP3LO60238 219 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 LRCH4O75427 683 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 LYNP07948 512 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 FAM58BPP0C7Q3 252 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 DPEP1P16444 411 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 GP5P40197 560 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 VSIG10LQ86VR7 867 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 C12orf29Q8N999 325 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 C10orf82Q8WW14 230 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 HTR3CQ8WXA8 447 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 CELF6Q96J87 481 aaKnown RBP14.29□□□□□ -0.12
COL6A1-201ENST00000361866 NDNQ99608 321 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 CHCHD3Q9NX63 227 aaKnown RBP14.29□□□□□ -0.12
COL6A1-201ENST00000361866 SNED1Q8TER0 1413 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 CDKN2BP42772 138 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 HSD17B4P51659 736 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 HADHBP55084 474 aaKnown RBP14.29□□□□□ -0.12
COL6A1-201ENST00000361866 BACE1P56817 501 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 POU6F1Q14863 301 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 C16orf72Q14CZ0 275 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 KIZQ2M2Z5 673 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 TATDN1Q6P1N9 297 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 METTL23Q86XA0 190 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 WDR60Q8WVS4 1066 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 SERAC1Q96JX3 654 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 MMP19Q99542 508 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 ADAM7Q9H2U9 754 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 RABGEF1Q9UJ41 708 aa14.29□□□□□ -0.12
COL6A1-201ENST00000361866 SRP72O76094 671 aaKnown RBP14.28□□□□□ -0.12
COL6A1-201ENST00000361866 EPHA3P29320 983 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 FDFT1P37268 417 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 SERPINB8P50452 374 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 CSHL1Q14406 222 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 UGP2Q16851 508 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 SLC44A4Q53GD3 710 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 LPCAT2Q7L5N7 544 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 NET1Q7Z628 596 aaPredicted RBP14.28□□□□□ -0.12
COL6A1-201ENST00000361866 SAMD3Q8N6K7 520 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 ZNF513Q8N8E2 541 aaPredicted RBP14.28□□□□□ -0.12
COL6A1-201ENST00000361866 CPXM1Q96SM3 734 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 SPON2Q9BUD6 331 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 TBC1D23Q9NUY8 699 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 LRRC37A3O60309 1634 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 MYH7P12883 1935 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 RNF103O00237 685 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 PIGNO95427 931 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 ACO1P21399 889 aaKnown RBP14.28□□□□□ -0.12
COL6A1-201ENST00000361866 INPP5AQ14642 412 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 PPP1R15BQ5SWA1 713 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 SETD3Q86TU7 594 aaPredicted RBP14.28□□□□□ -0.12
COL6A1-201ENST00000361866 C12orf56Q8IXR9 622 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 TRAPPC9Q96Q05 1148 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 FAM192AQ9GZU8 254 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 APOBEC3GQ9HC16 384 aaKnown RBP14.28□□□□□ -0.12
COL6A1-201ENST00000361866 LMO7Q8WWI1 1683 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 TMEM63AO94886 807 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 ALDH1A3P47895 512 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 ZDHHC14Q8IZN3 488 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.28□□□□□ -0.12
COL6A1-201ENST00000361866 RNF157Q96PX1 679 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 LGMNQ99538 433 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 SYT15Q9BQS2 421 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 PAIP2BQ9ULR5 123 aaKnown RBP14.28□□□□□ -0.12
COL6A1-201ENST00000361866 BCL9LQ86UU0 1499 aa14.28□□□□□ -0.12
COL6A1-201ENST00000361866 TCRBV7S3A2A0A539 114 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms