RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 UBOX5O94941 541 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 CYP2A7P20853 494 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 TRIM32Q13049 653 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 PKN1Q16512 942 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 ZSWIM7Q19AV6 140 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 GRTP1Q5TC63 336 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 PTAR1Q7Z6K3 402 aaPredicted RBP15.26■□□□□ 0.03
LMX1B-201ENST00000355497 ZNF512BQ96KM6 892 aaPredicted RBP15.26■□□□□ 0.03
LMX1B-201ENST00000355497 NT5MQ9NPB1 228 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 VAV3Q9UKW4 847 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 TPRKBQ9Y3C4 175 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 IPPQ9Y573 584 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 MYL12BO14950 172 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 BMP10O95393 424 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 GHRP10912 638 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 ATAD3BQ5T9A4 648 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 KRT74Q7RTS7 529 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 DAGLBQ8NCG7 672 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 UBASH3BQ8TF42 649 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 NOL6Q9H6R4 1146 aaKnown RBP15.26■□□□□ 0.03
LMX1B-201ENST00000355497 STK39Q9UEW8 545 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 ERI2A8K979 691 aaKnown RBP15.26■□□□□ 0.03
LMX1B-201ENST00000355497 PSMD12O00232 456 aaPredicted RBP15.26■□□□□ 0.03
LMX1B-201ENST00000355497 MSH4O15457 936 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 MYL12AP19105 171 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 PAICSP22234 425 aaKnown RBP15.26■□□□□ 0.03
LMX1B-201ENST00000355497 RAP1GAPP47736 663 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 TRAF3Q13114 568 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 CDC73Q6P1J9 531 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 ERO1BQ86YB8 467 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 POMGNT2Q8NAT1 580 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 COLGALT1Q8NBJ5 622 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 TPD52L3Q96J77 140 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 APOL2Q9BQE5 337 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 NFKBIZQ9BYH8 718 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 PBRM1Q86U86 1689 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 A0A087X0T9 212 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 HS6ST1O60243 411 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 FAM228BP0C875 321 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 ALOX12P18054 663 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 BMPR2Q13873 1038 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 AKIRIN2Q53H80 203 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 SPIRE2Q8WWL2 714 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 RORBQ92753 470 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 MED8Q96G25 268 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 ADPRHL2Q9NX46 363 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 TRPM5Q9NZQ8 1165 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 PLAGL2Q9UPG8 496 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 A0A0A6YYK5 440 aaPredicted RBP15.25■□□□□ 0.03
LMX1B-201ENST00000355497 CCDC154A6NI56 674 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 IFRD1O00458 451 aaPredicted RBP15.25■□□□□ 0.03
LMX1B-201ENST00000355497 ANTXR2P58335 489 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 CCNG2Q16589 344 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 KRT73Q86Y46 540 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 FAM151AQ8WW52 585 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 MAML3Q96JK9 1138 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 DSEQ9UL01 958 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 SF3B1O75533 1304 aaKnown RBP eCLIP15.25■□□□□ 0.03
LMX1B-201ENST00000355497 A2ML1A8K2U0 1454 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 PNMA8CA0A1B0GUJ8 204 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 TNFAIP8O95379 198 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 LSM8O95777 96 aaKnown RBP15.25■□□□□ 0.03
LMX1B-201ENST00000355497 TNNI3P19429 210 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 EFEMP1Q12805 493 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 PRKAA1Q13131 559 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 RABL6Q3YEC7 729 aaPredicted RBP15.25■□□□□ 0.03
LMX1B-201ENST00000355497 TMPRSS6Q8IU80 811 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 BTBD10Q9BSF8 475 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 UGT2B28Q9BY64 529 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 FUT8Q9BYC5 575 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 NDUFAF1Q9Y375 327 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 ENDOD1O94919 500 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 TSPAN19P0C672 248 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 THPOP40225 353 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 NAMPTP43490 491 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 SLC34A1Q06495 639 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 ZNF484Q5JVG2 852 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 SERAC1Q96JX3 654 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 SH3BP4Q9P0V3 963 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 ZNF624Q9P2J8 865 aaPredicted RBP15.25■□□□□ 0.03
LMX1B-201ENST00000355497 PRDM15P57071 1507 aaPredicted RBP15.25■□□□□ 0.03
LMX1B-201ENST00000355497 H3BMM5 538 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 CETPP11597 493 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 MAPK11Q15759 364 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 PAIP1Q9H074 479 aaKnown RBP15.25■□□□□ 0.03
LMX1B-201ENST00000355497 PIGUQ9H490 435 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 RIBC2Q9H4K1 309 aa15.25■□□□□ 0.03
LMX1B-201ENST00000355497 PROSCO94903 275 aa15.24■□□□□ 0.03
LMX1B-201ENST00000355497 LDLRP01130 860 aa15.24■□□□□ 0.03
LMX1B-201ENST00000355497 MSH3P20585 1137 aa15.24■□□□□ 0.03
LMX1B-201ENST00000355497 CHRNA5P30532 468 aa15.24■□□□□ 0.03
LMX1B-201ENST00000355497 PRKAA2P54646 552 aa15.24■□□□□ 0.03
LMX1B-201ENST00000355497 GRB10Q13322 594 aa15.24■□□□□ 0.03
LMX1B-201ENST00000355497 TAB1Q15750 504 aa15.24■□□□□ 0.03
LMX1B-201ENST00000355497 GNASQ5JWF2 1037 aa15.24■□□□□ 0.03
LMX1B-201ENST00000355497 N4BP2L1Q5TBK1 243 aaPredicted RBP15.24■□□□□ 0.03
LMX1B-201ENST00000355497 SLC25A24Q6NUK1 477 aa15.24■□□□□ 0.03
LMX1B-201ENST00000355497 NARS2Q96I59 477 aaKnown RBP15.24■□□□□ 0.03
LMX1B-201ENST00000355497 MYRFQ9Y2G1 1151 aa15.24■□□□□ 0.03
LMX1B-201ENST00000355497 CLOCKO15516 846 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms