RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 RNF19AQ9NV58 838 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 SNX8Q9Y5X2 465 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 WDR27A2RRH5 827 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 BAIAP3O94812 1187 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 AMPD1P23109 780 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 VHLP40337 213 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 BNC2Q6ZN30 1099 aaPredicted RBP13.56□□□□□ -0.24
SCN8A-202ENST00000355133 LRRC8DQ7L1W4 858 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 PALMDQ9NP74 551 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 REREQ9P2R6 1566 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 WNT10BO00744 389 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 MMRN1Q13201 1228 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 SMARCD1Q96GM5 515 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 CAMKK2Q96RR4 588 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 CDK5RAP1Q96SZ6 601 aaKnown RBP13.56□□□□□ -0.24
SCN8A-202ENST00000355133 FBXO44Q9H4M3 255 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 KCNQ5Q9NR82 932 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 INTS13Q9NVM9 706 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 A0A0A6YYK5 440 aaPredicted RBP13.56□□□□□ -0.24
SCN8A-202ENST00000355133 CYP7B1O75881 506 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 SERPINF2P08697 491 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 CCDC130P13994 396 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 SLC2A4P14672 509 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 MGAT5Q09328 741 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 SLC39A12Q504Y0 691 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 CBWD3Q5JTY5 395 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 CBWD5Q5RIA9 395 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 MTSS1LQ765P7 747 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 C16orf59Q7L2K0 433 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 IGFLR1Q9H665 355 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 WDR41Q9HAD4 459 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 TRPC4Q9UBN4 977 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 TDRKHQ9Y2W6 561 aaKnown RBP13.56□□□□□ -0.24
SCN8A-202ENST00000355133 TCRBV5S4A2TA0A5A2 114 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 TOMM70O94826 608 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 ADCYAP1R1P41586 468 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 C1QBPQ07021 282 aaKnown RBP13.56□□□□□ -0.24
SCN8A-202ENST00000355133 FIGNQ5HY92 759 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 SLC2A14Q8TDB8 520 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 SERAC1Q96JX3 654 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 ZBTB45Q96K62 511 aaPredicted RBP13.56□□□□□ -0.24
SCN8A-202ENST00000355133 TBC1D23Q9NUY8 699 aa13.56□□□□□ -0.24
SCN8A-202ENST00000355133 ABCB1P08183 1280 aaPredicted RBP13.55□□□□□ -0.24
SCN8A-202ENST00000355133 AKR1A1P14550 325 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 BEX3Q00994 111 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 LGI2Q8N0V4 545 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 PDGFDQ9GZP0 370 aaPredicted RBP13.55□□□□□ -0.24
SCN8A-202ENST00000355133 DDX4Q9NQI0 724 aaKnown RBP13.55□□□□□ -0.24
SCN8A-202ENST00000355133 PIK3CDO00329 1044 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 CNTFP26441 200 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 PSEN2P49810 448 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 DSG1Q02413 1049 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 NR6A1Q15406 480 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 NTRK3Q16288 839 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 EARS2Q5JPH6 523 aaKnown RBP13.55□□□□□ -0.24
SCN8A-202ENST00000355133 PDPK2PQ6A1A2 396 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 MTDHQ86UE4 582 aaKnown RBP13.55□□□□□ -0.24
SCN8A-202ENST00000355133 CDCA5Q96FF9 252 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 MIEF1Q9NQG6 463 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 NCKIPSDQ9NZQ3 722 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 DLGAP2Q9P1A6 1054 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 NRXN1Q9ULB1 1477 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 A8MX80 341 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 NCAM2O15394 837 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 TPBGLP0DKB5 382 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 YWHAQP27348 245 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 SGCGQ13326 291 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 ARHGAP17Q68EM7 881 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 RETSATQ6NUM9 610 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 OTOP1Q7RTM1 612 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 SLC5A5Q92911 643 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 CEP170BQ9Y4F5 1589 aaPredicted RBP13.55□□□□□ -0.24
SCN8A-202ENST00000355133 CXCL11O14625 94 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 SERPINB3P29508 390 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 YWHAZP63104 245 aaKnown RBP13.55□□□□□ -0.24
SCN8A-202ENST00000355133 PPATQ06203 517 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 BOP1Q14137 746 aaKnown RBP13.55□□□□□ -0.24
SCN8A-202ENST00000355133 FAM180AQ6UWF9 173 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 CES3Q6UWW8 571 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 SCUBE1Q8IWY4 988 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 RAD54BQ9Y620 910 aa13.55□□□□□ -0.24
SCN8A-202ENST00000355133 MANSC4A6NHS7 340 aaPredicted RBP13.54□□□□□ -0.24
SCN8A-202ENST00000355133 PDZK1P1A8MUH7 402 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 SMNDC1O75940 238 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCN8A-202ENST00000355133 MGAT1P26572 445 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 RENBPP51606 427 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 PPP1R13LQ8WUF5 828 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 HNRNPLLQ8WVV9 542 aaKnown RBP13.54□□□□□ -0.24
SCN8A-202ENST00000355133 DCLK3Q9C098 648 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 MMP14P50281 582 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 DEFA1P59665 94 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 DEFA3P59666 94 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 ACVR2BQ13705 512 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 ACOX1Q15067 660 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 PAPD7Q5XG87 772 aaKnown RBP13.54□□□□□ -0.24
SCN8A-202ENST00000355133 CYP4Z1Q86W10 505 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 DEFB106AQ8N104 65 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 CYP39A1Q9NYL5 469 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 DPP7Q9UHL4 492 aa13.54□□□□□ -0.24
SCN8A-202ENST00000355133 MEGF6O75095 1541 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms