RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 NFS1Q9Y697 457 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 BCL9O00512 1426 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 DLGAP3O95886 979 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ETS2P15036 469 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 STAT5BP51692 787 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 TMEM132DQ14C87 1099 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 CNPY1Q3B7I2 92 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 PPP1R15BQ5SWA1 713 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ALYREFQ86V81 257 aaKnown RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 CCDC60Q8IWA6 550 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 NDEL1Q9GZM8 345 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 PNPLA3Q9NST1 481 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ITGA11Q9UKX5 1188 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 GMEB1Q9Y692 573 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 NUP98P52948 1817 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 COL5A2P05997 1499 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 C15orf38-AP3S2A0A0A6YYH1 394 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 PTP4A2Q12974 167 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ARPINQ7Z6K5 226 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 GIPC3Q8TF64 312 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 UGT2B28Q9BY64 529 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 EURLQ9NYK6 297 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 OGTO15294 1046 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 CHRNB3Q05901 458 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 FAAP100Q0VG06 881 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 DMC1Q14565 340 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ARSHQ5FYA8 562 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ATF7IP2Q5U623 682 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 CHSY1Q86X52 802 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ULK4Q96C45 1275 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 CGRRF1Q99675 332 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 TRIM54Q9BYV2 358 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 DHX33Q9H6R0 707 aaKnown RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 RUBCNLQ9H714 662 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 KCNQ5Q9NR82 932 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 CROTQ9UKG9 612 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 NDUFAF1Q9Y375 327 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 SUPT7LO94864 414 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 RBP1P09455 135 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 VEGFAP15692 232 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 JAK1P23458 1154 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 CCNG1P51959 295 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 SUPT20HL1Q3ZLR7 823 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 LAYNQ6UX15 382 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 LRP10Q7Z4F1 713 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ATPAF2Q8N5M1 289 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 TUBGCP3Q96CW5 907 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 KIF12Q96FN5 646 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 WDR12Q9GZL7 423 aaKnown RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ACAD9Q9H845 621 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 GPRC5CQ9NQ84 441 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 TEKT2Q9UIF3 430 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 NOD1Q9Y239 953 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ACOT9Q9Y305 439 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 SIGLEC16A6NMB1 481 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ASNA1O43681 348 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 KATNA1O75449 491 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ITGB3P05106 788 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 GLRA2P23416 452 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 SLC25A3Q00325 362 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 TIGD7Q6NT04 549 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 TMC5Q6UXY8 1006 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 CLEC10AQ8IUN9 316 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 EID3Q8N140 333 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 SEC14L1Q92503 715 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 FAM162AQ96A26 154 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 TBCBQ99426 244 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 RPAP3Q9H6T3 665 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 UTP6Q9NYH9 597 aaKnown RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 GRHL1Q9NZI5 618 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ZNF180Q9UJW8 692 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 PPME1Q9Y570 386 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 TNS2Q63HR2 1409 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 TRIM13O60858 407 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 VDRP11473 427 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 COX4I1P13073 169 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 RARRES1P49788 294 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 MGAT5Q09328 741 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 MFSD7Q6UXD7 560 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 DENND5BQ6ZUT9 1274 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 GSTCDQ8NEC7 633 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 UBA3Q8TBC4 463 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 CATSPERBQ9H7T0 1116 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 NMRAL1Q9HBL8 299 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 GIMAP4Q9NUV9 329 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.91□□□□□ -1.623e-30■■■■■ 247.4
CSMD3-203ENST00000343508 MPP6Q9NZW5 540 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 AP4B1Q9Y6B7 739 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 TCRBV9S1A1TA0A576 114 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ADCY4Q8NFM4 1077 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 BORCS5Q969J3 196 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 TMEM176AQ96HP8 235 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ZDHHC15Q96MV8 337 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 RNF146Q9NTX7 359 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 FAM49BQ9NUQ9 324 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ETNK2Q9NVF9 386 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 COMMD8Q9NX08 183 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 USP20Q9Y2K6 914 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 TMX2Q9Y320 296 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 KAT6AQ92794 2004 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms