RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 DNAJC25-GNG10A0A024R161 153 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 CREB3O43889 395 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 LMO2P25791 158 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 ADORA2AP29274 412 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 L1CAMP32004 1257 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 PEX19P40855 299 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 ABL2P42684 1182 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 RPL10AP62906 217 aaKnown RBP14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 TSNAXIP1Q2TAA8 658 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 CES4AQ5XG92 561 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 SLC35F5Q8WV83 523 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 DNAJC9Q8WXX5 260 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 CLPTM1LQ96KA5 538 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 SIGLEC10Q96LC7 697 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 CNTN3Q9P232 1028 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 LYPLA1O75608 230 aaPredicted RBP14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 KCNA4P22459 653 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 STX3Q13277 289 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 C9orf131Q5VYM1 1079 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 TREML1Q86YW5 311 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 ZNF670Q9BS34 389 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 TUBB6Q9BUF5 446 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 BATF3Q9NR55 127 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 HNRNPCL1O60812 293 aaKnown RBP14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 PDE1BQ01064 536 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 KYAT1Q16773 422 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 ZNF618Q5T7W0 954 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 STKLD1Q8NE28 680 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 CSPG4P5Q96PW8 444 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 KCTD15Q96SI1 283 aaPredicted RBP14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 TBCBQ99426 244 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 THTPAQ9BU02 230 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 SLC4A5Q9BY07 1137 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 SHCBP1LQ9BZQ2 653 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 C20orf27Q9GZN8 174 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 STOML1Q9UBI4 398 aa14.51□□□□□ -0.09
ATP2C1-201ENST00000328560 TRDMT1O14717 391 aaKnown RBP14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 TGDSO95455 350 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 C1QAP02745 245 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 ARL4AP40617 200 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 FAM187BQ17R55 369 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 CAPRIN2Q6IMN6 1127 aaKnown RBP14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 TMEM110Q86TL2 294 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 AGAP3Q96P47 875 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 OSMRQ99650 979 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 EBF4Q9BQW3 602 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 GOLGA2P5Q9HBQ8 144 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 SPON1Q9HCB6 807 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 DONSONQ9NYP3 566 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 PRKCHP24723 683 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 MGAT1P26572 445 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 NME3Q13232 169 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 UBAP2LQ14157 1087 aaKnown RBP14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 STILQ15468 1287 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 GRIK4Q16099 956 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 DCAF6Q58WW2 860 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 SNX30Q5VWJ9 437 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 TRIM42Q8IWZ5 723 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 LMNTD2Q8IXW0 634 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 CFAP61Q8NHU2 1237 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 SLC2A14Q8TDB8 520 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 TEKT4Q8WW24 435 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 FRMD8Q9BZ67 464 aaPredicted RBP14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 NXF3Q9H4D5 531 aaKnown RBP14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 PNPLA8Q9NP80 782 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 DTLQ9NZJ0 730 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 SIP14410 1827 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 NVLO15381 856 aaKnown RBP14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 EPHX2P34913 555 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 GTF2A2P52657 109 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 SNX16P57768 344 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 OLIG2Q13516 323 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 ZNF534Q76KX8 674 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 SLC25A41Q8N5S1 370 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 NFKBIZQ9BYH8 718 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 CDHR5Q9HBB8 845 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 TXNDC16Q9P2K2 825 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 MGAMO43451 1857 aa14.5□□□□□ -0.09
ATP2C1-201ENST00000328560 HMX2A2RU54 273 aa14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 MEI4A8MW99 385 aa14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 LUC7L3O95232 432 aaKnown RBP14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 PITX1P78337 314 aaPredicted RBP14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 FASTKD1Q53R41 847 aaKnown RBP14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 COLGALT1Q8NBJ5 622 aa14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 BEST2Q8NFU1 509 aa14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 TFB1MQ8WVM0 346 aaKnown RBP14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 HTR3CQ8WXA8 447 aa14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 WWP1Q9H0M0 922 aa14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 SNX25Q9H3E2 840 aa14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 KCNH4Q9UQ05 1017 aa14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 MDM4O15151 490 aa14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 USP12O75317 370 aa14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 BAG2O95816 211 aa14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 GNL1P36915 607 aaPredicted RBP14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 SULT1E1P49888 294 aa14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 RABGGTBP53611 331 aa14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 SARNPP82979 210 aaKnown RBP14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 RSPH3Q86UC2 560 aa14.49□□□□□ -0.09
ATP2C1-201ENST00000328560 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms