RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 DNAJB11Q9UBS4 358 aa3.62□□□□□ -1.83
CBX3P1-201ENST00000325243 AFF4Q9UHB7 1163 aaKnown RBP3.62□□□□□ -1.83
CBX3P1-201ENST00000325243 L1RE1Q9UN81 338 aa3.62□□□□□ -1.83
CBX3P1-201ENST00000325243 HEMK1Q9Y5R4 338 aaPredicted RBP3.62□□□□□ -1.83
CBX3P1-201ENST00000325243 A0A087WYN8 130 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 AQP7P3A6NL99 342 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 TNFRSF13BO14836 293 aaPredicted RBP3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 CTNND1O60716 968 aaKnown RBP3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 USP12O75317 370 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 TMEM225BP0DP42 221 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 RBL1P28749 1068 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 LTBQ06643 244 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 MTAPQ13126 283 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 NFATC4Q14934 902 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 CLCA4Q14CN2 919 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 C3orf38Q5JPI3 329 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 C9orf50Q5SZB4 431 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 GFI1BQ5VTD9 330 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 APOA5Q6Q788 366 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 RBM23Q86U06 439 aaKnown RBP3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 P3H2Q8IVL5 708 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 ADGRF4Q8IZF3 695 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 IQCF1Q8N6M8 205 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 WFIKKN2Q8TEU8 576 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 STAG1Q8WVM7 1258 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 ZDHHC12Q96GR4 267 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 RBM38Q9H0Z9 239 aaKnown RBP3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 MID2Q9UJV3 735 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 ANAPC4Q9UJX5 808 aa3.61□□□□□ -1.83
CBX3P1-201ENST00000325243 ACOT8O14734 319 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 SNX2O60749 519 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 INMTO95050 263 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 IGKV3-20P01619 116 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 PDGFRBP09619 1106 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 TXNP10599 105 aaKnown RBP3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 BRAFP15056 766 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 TPH1P17752 444 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 TFEBP19484 476 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 SOX2P48431 317 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 EPHB1P54762 984 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 RPS16P62249 146 aaKnown RBP3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 GAB1Q13480 694 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 CNN3Q15417 329 aaKnown RBP3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 CNGA2Q16280 664 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 SMTNL2Q2TAL5 461 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 MANEALQ5VSG8 457 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 MZT2AQ6P582 158 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 TRAPPC11Q7Z392 1133 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 TMPRSS12Q86WS5 348 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 SMCR8Q8TEV9 937 aaPredicted RBP3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 EME1Q96AY2 570 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 SLITRK1Q96PX8 696 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 ZCWPW1Q9H0M4 648 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 CHST8Q9H2A9 424 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 FZD3Q9NPG1 666 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 ABHD10Q9NUJ1 306 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 DDX56Q9NY93 547 aaKnown RBP3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 TPCN1Q9ULQ1 816 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 CAPN11Q9UMQ6 739 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 COL15A1P39059 1388 aa3.6□□□□□ -1.83
CBX3P1-201ENST00000325243 KIR2DS5A0A0G2JLQ3 304 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 CFAP69A5D8W1 941 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 A6NNC1 897 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 H0YGN5 161 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 KIR2DS3K7RE56 304 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 PRYO14603 147 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 U2AF1L5P0DN76 240 aaPredicted RBP3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 YY1P25490 414 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 VPS41P49754 854 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 U2AF1Q01081 240 aaKnown RBP eCLIP3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 CNGA3Q16281 694 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 AASDHQ4L235 1098 aaPredicted RBP3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 ASPHD1Q5U4P2 390 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 PLAG1Q6DJT9 500 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 CXorf57Q6NSI4 855 aaKnown RBP3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 PDXDC1Q6P996 788 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 ZNF329Q86UD4 541 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 YAF2Q8IY57 180 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 CELF1Q92879 486 aaKnown RBP3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 PIMREGQ9BSJ6 248 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 SELENOOQ9BVL4 669 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 ASNSD1Q9NWL6 643 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 COL20A1Q9P218 1284 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 VPS4AQ9UN37 437 aa3.59□□□□□ -1.83
CBX3P1-201ENST00000325243 PRPF4O43172 522 aaKnown RBP eCLIP3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 WDR47O94967 919 aa3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 CHRNB1P11230 501 aa3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 ZKSCAN1P17029 563 aaPredicted RBP3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 BTF3P20290 206 aaKnown RBP3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 FMO1Q01740 532 aa3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 PGM5Q15124 567 aa3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 PIK3CD-AS1Q5SR53 167 aa3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 TRILQ7L0X0 811 aa3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 UEVLDQ8IX04 471 aa3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 FSTL5Q8N475 847 aaPredicted RBP3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 ARL14EPQ8N8R7 260 aaPredicted RBP3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 AS3MTQ9HBK9 375 aa3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 CD93Q9NPY3 652 aa3.58□□□□□ -1.84
CBX3P1-201ENST00000325243 C1orf112Q9NSG2 853 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms