RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 TUBA8Q9NY65 449 aaPredicted RBP17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 ACOT9Q9Y305 439 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 EMILIN2Q9BXX0 1053 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 SHOC2Q9UQ13 582 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 GLP2RO95838 553 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 PI4K2AQ9BTU6 479 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 GRIP2Q9C0E4 1043 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 NDUFAF1Q9Y375 327 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 TXNP10599 105 aaKnown RBP17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 GZMAP12544 262 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 AP3S1Q92572 193 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 CYP4F12Q9HCS2 524 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 LNPEPQ9UIQ6 1025 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 GSTK1Q9Y2Q3 226 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 AP3M1Q9Y2T2 418 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 SSNA1O43805 119 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 GAS2O43903 313 aaKnown RBP17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 ITGADQ13349 1161 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 NR6A1Q15406 480 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 IGDCC4Q8TDY8 1250 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 WDR60Q8WVS4 1066 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 PARNO95453 639 aaKnown RBP17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 SERPINE1P05121 402 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 GARTP22102 1010 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 S100ZQ8WXG8 99 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 PIGBQ92521 554 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 ZNF518BQ9C0D4 1074 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 EPB41L4AQ9HCS5 686 aaPredicted RBP17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 SKIV2L2P42285 1042 aaKnown RBP17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 CCDC80Q76M96 950 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 CAPSLQ8WWF8 208 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 TMEM237Q96Q45 408 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 ABCA6Q8N139 1617 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 CES2O00748 559 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 TBC1D12O60347 775 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 ATP4AP20648 1035 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 NR2C2P49116 596 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 PTENP60484 403 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 ZNF543Q08ER8 600 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 MTMR2Q13614 643 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 FRG1Q14331 258 aaKnown RBP17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 GRTP1Q5TC63 336 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 ARHGEF19Q8IW93 802 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 ADHFE1Q8IWW8 467 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 STARD8Q92502 1023 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 CPNE1Q99829 537 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 NPR3P17342 541 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 LBPP18428 481 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 RFX3P48380 749 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 TDRD10Q5VZ19 366 aaKnown RBP17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 SETBP1Q9Y6X0 1596 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 GUCY1B2O75343 617 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 FSBPO95073 299 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 PRCCQ92733 491 aaPredicted RBP17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 STN1Q9H668 368 aaKnown RBP17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 GPAMQ9HCL2 828 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 ADPRHL2Q9NX46 363 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 CYP11B1P15538 503 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 GRIK3Q13003 919 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 RSL24D1Q9UHA3 163 aaKnown RBP17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 ZC3H11AO75152 810 aaKnown RBP eCLIP17.29■□□□□ 0.361e-6■■■■■ 28.2
SMCHD1-201ENST00000320876 STAU1O95793 577 aaKnown RBP17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 GTF2E2P29084 291 aaKnown RBP17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 NKX1-1Q15270 411 aaPredicted RBP17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 RRN3Q9NYV6 651 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 CRNNQ9UBG3 495 aaPredicted RBP17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 PTGES3LE9PB15 166 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 HLFQ16534 295 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 ATG4AQ8WYN0 398 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 MAP3K14Q99558 947 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 AHSPQ9NZD4 102 aa17.29■□□□□ 0.36
SMCHD1-201ENST00000320876 CPSF4O95639 269 aaKnown RBP17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 MSH3P20585 1137 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 SLC11A2P49281 568 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 MPP3Q13368 585 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 TEX13BQ9BXU2 312 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 NRDE2Q9H7Z3 1164 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 RPA1P27694 616 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 CRABP2P29373 138 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 UBA3Q8TBC4 463 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 TMEM121Q9BTD3 319 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 MTMR4Q9NYA4 1195 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 KCNH4Q9UQ05 1017 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 DDHD2O94830 711 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 MCL1Q07820 350 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 ZNF614Q8N883 585 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 COMMD9Q9P000 198 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 UNC13BO14795 1591 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 CBFA2T3O75081 653 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 NR1D2Q14995 579 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 COMMD2Q86X83 199 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 RNF145Q96MT1 663 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 TDRD3Q9H7E2 651 aaKnown RBP17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 LOC100506127A0A0U1RQW1 187 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 DSG3P32926 999 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 FNDC5Q8NAU1 212 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 CROTQ9UKG9 612 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 ING4Q9UNL4 249 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 IGKV5-2P06315 115 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms