RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 BAZ2AQ9UIF9 1905 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 CDC25CP30307 473 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 CHRNA5P30532 468 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 HADHBP55084 474 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SLC6A3Q01959 620 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 RUNX1T1Q06455 604 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 LBRQ14739 615 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 LONRF1Q17RB8 773 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ACCSLQ4AC99 568 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 WASHC2DQ5SRD0 308 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 DCLRE1AQ6PJP8 1040 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 USP45Q70EL2 814 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SLC30A8Q8IWU4 369 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ELMO2Q96JJ3 720 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 HMX1Q9NP08 348 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 STARD7Q9NQZ5 370 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ATAD3AQ9NVI7 634 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 DDIT4Q9NX09 232 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 A0A0G2JLW4 131 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TGDSO95455 350 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TTPAP49638 278 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 THEMIS2Q5TEJ8 643 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 OVOS1Q6IE37 1185 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TMEM199Q8N511 208 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 STK32AQ8WU08 396 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ZFRQ96KR1 1074 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 CCT8L2Q96SF2 557 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SLC9A7Q96T83 725 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ETNK1Q9HBU6 452 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 KLHL28Q9NXS3 571 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TAS2R13Q9NYV9 303 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ADA2Q9NZK5 511 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 H2AFY2Q9P0M6 372 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SPDYE5A6NIY4 337 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SYNCRIPO60506 623 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 LDOC1O95751 146 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 COL6A2P12110 1019 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ITGADQ13349 1161 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SPDYE7PQ495Y7 208 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 APOBEC3HQ6NTF7 200 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 PAGE2Q7Z2X7 111 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 DDIASQ8IXT1 998 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 MPP5Q8N3R9 675 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ZNF248Q8NDW4 579 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 PLEKHA8Q96JA3 519 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ASCC2Q9H1I8 757 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SMURF2Q9HAU4 748 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 RBAK-RBAKDNI3L0D1 243 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TRAFD1O14545 582 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TEX33O43247 280 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 GCATO75600 419 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ITGB3P05106 788 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ANXA6P08133 673 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 KELP23276 732 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 THPOP40225 353 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 CACNB3P54284 484 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 YWHAZP63104 245 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 MRPS6P82932 125 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 IKBKEQ14164 716 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 E2F4Q16254 413 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 KLHL35Q6PF15 583 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 PACS1Q6VY07 963 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SH3BP5LQ7L8J4 393 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 PHF21AQ96BD5 680 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TSC22D3Q99576 134 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 NIFKQ9BYG3 293 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TMEM117Q9H0C3 514 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 AMACRQ9UHK6 382 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ACOT9Q9Y305 439 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SUPT3HB4E1H0 165 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SERPINE1P05121 402 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 OR56A5P0C7T3 313 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 KLRC1P26715 233 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 CD151P48509 253 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 CLCN5P51795 746 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 PKN1Q16512 942 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TRIM60Q495X7 471 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 C9orf131Q5VYM1 1079 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TRMT11Q7Z4G4 463 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 DCLRE1BQ9H816 532 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SSU72Q9NP77 194 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 LATS2Q9NRM7 1088 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 PCSK1NQ9UHG2 260 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 AP4E1Q9UPM8 1137 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 EPHB2P29323 1055 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ZNF143P52747 638 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ATP6V0D1P61421 351 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 KLC1Q07866 573 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 NSUN2Q08J23 767 aaKnown RBP eCLIP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TOP3AQ13472 1001 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 FAM71AQ8IYT1 594 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 RPRD1BQ9NQG5 326 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 PSME2Q9UL46 239 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TRAV19A0A0A6YYK7 116 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ZBBXA8MT70 800 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 RAMP2O60895 175 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TRPA1O75762 1119 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ASS1P00966 412 aaKnown RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 ITGA8P53708 1063 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms