RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 HDAC7Q8WUI4 952 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 MTFMTQ96DP5 389 aaKnown RBP19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 ATP13A1Q9HD20 1204 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 TMEM39AQ9NV64 488 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 PCDHB12Q9Y5F1 795 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 RARGP13631 454 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 RAG1P15918 1043 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 NR6A1Q15406 480 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 GRIK5Q16478 980 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 DEFB106AQ8N104 65 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 RNF148Q8N7C7 305 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 FUT8Q9BYC5 575 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 ZMYM5Q9UJ78 669 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 ITGA11Q9UKX5 1188 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 NCOA3Q9Y6Q9 1424 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 APOA4P06727 396 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 CCDC15Q0P6D6 951 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 KDM7AQ6ZMT4 941 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 HERC6Q8IVU3 1022 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 LGI2Q8N0V4 545 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 TSEN34Q9BSV6 310 aaKnown RBP19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 TMEM245Q9H330 911 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 DSEQ9UL01 958 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 GSNP06396 782 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 GZMAP12544 262 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 PLD1Q13393 1074 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 CBWD6Q4V339 395 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 PDPK2PQ6A1A2 396 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 ZCCHC23Q6ZST2 131 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 SETD3Q86TU7 594 aaPredicted RBP19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 ADGRE3Q9BY15 652 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 CCNG1P51959 295 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 TEX9Q8N6V9 391 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 MAN1C1Q9NR34 630 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 NAALADL1Q9UQQ1 740 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 GAKO14976 1311 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 FBXO21O94952 628 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 TRAF2Q12933 501 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 RASA2Q15283 850 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 SLC26A11Q86WA9 606 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 PALB2Q86YC2 1186 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 KRT78Q8N1N4 520 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 DNERQ8NFT8 737 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 ZMAT2Q96NC0 199 aaKnown RBP19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 MTG1Q9BT17 334 aaPredicted RBP19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 ZNF518BQ9C0D4 1074 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 PCDHB5Q9Y5E4 795 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 TNS2Q63HR2 1409 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 ITGA9Q13797 1035 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 N4BP2L1Q5TBK1 243 aaPredicted RBP19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 DNAJC14Q6Y2X3 702 aaPredicted RBP19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 ACTRT1Q8TDG2 376 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 SEPHS2Q99611 448 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 SH3BP4Q9P0V3 963 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 SHOC2Q9UQ13 582 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 PIK3C2BO00750 1634 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 TNIP2Q8NFZ5 429 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 APBA2Q99767 749 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 OSBPL10Q9BXB5 764 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 ELOVL6Q9H5J4 265 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 RAMP2O60895 175 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 TGFB2P61812 414 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 CDKAL1Q5VV42 579 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 KAT5Q92993 513 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 INTS13Q9NVM9 706 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 ZSCAN5DPP0CG00 497 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 MFSD7Q6UXD7 560 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 ISLR2Q6UXK2 745 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 SERAC1Q96JX3 654 aa19.17■□□□□ 0.66
SMARCC1-201ENST00000254480 BUD23O43709 281 aaKnown RBP19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 MMRN1Q13201 1228 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 PPP1R10Q96QC0 940 aaKnown RBP19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 FRMD8Q9BZ67 464 aaPredicted RBP19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 EFCAB1Q9HAE3 211 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 KRT84Q9NSB2 600 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 ZSCAN32Q9NX65 697 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 PIK3CDO00329 1044 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 VAPBO95292 243 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 FAM153BP0C7A2 387 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 TCF3P15923 654 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 CCNG2Q16589 344 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 FAM153CQ494X1 144 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 TRIM69Q86WT6 500 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 SCUBE1Q8IWY4 988 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 KIRREL3Q8IZU9 778 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 GAD1Q99259 594 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 DCLK3Q9C098 648 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 FAM153AQ9UHL3 310 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 CRYL1Q9Y2S2 319 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 PDZK1P1A8MUH7 402 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 E5RJQ4 531 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 THRAP10827 490 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 RPL21P46778 160 aaKnown RBP19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 BNC2Q6ZN30 1099 aaPredicted RBP19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 CTNNAL1Q9UBT7 734 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 HOXA2O43364 376 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 KRT8P05787 483 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 ERVK-10P10266 1014 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 SLC27A1Q6PCB7 646 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms