RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 ATF2P15336 505 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 VPS41P49754 854 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 RPL10AP62906 217 aaKnown RBP15.78■□□□□ 0.12
HDHD3-201ENST00000238379 FPGSQ05932 587 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 CALCOCO2Q13137 446 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 SEMA3BQ13214 749 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 CCHCR1Q8TD31 782 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 RNF139Q8WU17 664 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 HERC2P3Q9BVR0 1158 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 SMOC2Q9H3U7 446 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 OGFRQ9NZT2 677 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 PRKAG2Q9UGJ0 569 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 PLXNA3P51805 1871 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 ZBBXA8MT70 800 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 FAM72CH0Y354 149 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 SGK1O00141 431 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 IRAK2O43187 625 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 RTN3O95197 1032 aaPredicted RBP15.78■□□□□ 0.12
HDHD3-201ENST00000238379 GJB5O95377 273 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 ETS1P14921 441 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 ZFXP17010 805 aaPredicted RBP15.78■□□□□ 0.12
HDHD3-201ENST00000238379 ATF6P18850 670 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 AMPD1P23109 780 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 YWHAQP27348 245 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 GLUD2P49448 558 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 GDF10P55107 478 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 HTRA4P83105 476 aaPredicted RBP15.78■□□□□ 0.12
HDHD3-201ENST00000238379 ARL13BQ3SXY8 428 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 FAM72AQ5TYM5 149 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 FAM72DQ6L9T8 149 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 RHBDF2Q6PJF5 856 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 TMC3Q7Z5M5 1100 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 DDX53Q86TM3 631 aaKnown RBP15.78■□□□□ 0.12
HDHD3-201ENST00000238379 FAM72BQ86X60 149 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 ARHGAP18Q8N392 663 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 CASP10Q92851 521 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 TXLNGYQ9BZA5 131 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 PCDH9Q9HC56 1237 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 GMIPQ9P107 970 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 HEY1Q9Y5J3 304 aa15.78■□□□□ 0.12
HDHD3-201ENST00000238379 ALPK3Q96L96 1907 aa15.77■□□□□ 0.12
HDHD3-201ENST00000238379 SPDYE4A6NLX3 237 aa15.77■□□□□ 0.11
HDHD3-201ENST00000238379 H3BRJ5 948 aa15.77■□□□□ 0.11
HDHD3-201ENST00000238379 ABLIM3O94929 683 aa15.77■□□□□ 0.11
HDHD3-201ENST00000238379 LINC00271P0C7V0 271 aa15.77■□□□□ 0.11
HDHD3-201ENST00000238379 SLC10A2Q12908 348 aaPredicted RBP15.77■□□□□ 0.11
HDHD3-201ENST00000238379 MTMR3Q13615 1198 aa15.77■□□□□ 0.11
HDHD3-201ENST00000238379 NCBP2-AS2Q69YL0 99 aa15.77■□□□□ 0.11
HDHD3-201ENST00000238379 ZC3H18Q86VM9 953 aaKnown RBP15.77■□□□□ 0.11
HDHD3-201ENST00000238379 UNC45BQ8IWX7 931 aa15.77■□□□□ 0.11
HDHD3-201ENST00000238379 LRRC45Q96CN5 670 aa15.77■□□□□ 0.11
HDHD3-201ENST00000238379 TKTL2Q9H0I9 626 aa15.77■□□□□ 0.11
HDHD3-201ENST00000238379 PRDM16Q9HAZ2 1276 aa15.77■□□□□ 0.11
HDHD3-201ENST00000238379 ARHGEF4Q9NR80 690 aa15.77■□□□□ 0.11
HDHD3-201ENST00000238379 ETNK2Q9NVF9 386 aa15.77■□□□□ 0.11
HDHD3-201ENST00000238379 COMMD8Q9NX08 183 aa15.77■□□□□ 0.11
HDHD3-201ENST00000238379 CXXC1Q9P0U4 656 aaPredicted RBP15.77■□□□□ 0.11
HDHD3-201ENST00000238379 AFF4Q9UHB7 1163 aaKnown RBP15.77■□□□□ 0.11
HDHD3-201ENST00000238379 SFMBT1Q9UHJ3 866 aa15.77■□□□□ 0.11
HDHD3-201ENST00000238379 MYO16Q9Y6X6 1858 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 PPFIA2O75334 1257 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 STIP1P31948 543 aaKnown RBP15.76■□□□□ 0.11
HDHD3-201ENST00000238379 NR2C2P49116 596 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 ITGA8P53708 1063 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 GBE1Q04446 702 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 P3H1Q32P28 736 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 TMEM240Q5SV17 173 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 MSANTD2Q6P1R3 559 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 IQCKQ8N0W5 287 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 ZNF461Q8TAF7 563 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 RSAD2Q8WXG1 361 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 FBXO32Q969P5 355 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 CEP295NLQ96MC4 621 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 ADAM7Q9H2U9 754 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 MTRF1LQ9UGC7 380 aaKnown RBP15.76■□□□□ 0.11
HDHD3-201ENST00000238379 NUDT5Q9UKK9 219 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 MFHAS1Q9Y4C4 1052 aa15.76■□□□□ 0.11
HDHD3-201ENST00000238379 AGPSO00116 658 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 CREB3O43889 395 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 SEC24AO95486 1093 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 IFNB1P01574 187 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 PPM1AP35813 382 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 HCAR3P49019 387 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 TUFMP49411 452 aaKnown RBP15.75■□□□□ 0.11
HDHD3-201ENST00000238379 CAV1Q03135 178 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 DHX9Q08211 1270 aaKnown RBP15.75■□□□□ 0.11
HDHD3-201ENST00000238379 TAF10Q12962 218 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 GPS1Q13098 491 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 DPYSQ14117 519 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 UAP1Q16222 522 aaPredicted RBP15.75■□□□□ 0.11
HDHD3-201ENST00000238379 BRMS1LQ5PSV4 323 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 TPGS2Q68CL5 300 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 DARS2Q6PI48 645 aaKnown RBP15.75■□□□□ 0.11
HDHD3-201ENST00000238379 RFX8Q6ZV50 586 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 B4GALNT4Q76KP1 1039 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 VPS52Q8N1B4 723 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 FAM71DQ8N9W8 422 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 BBOF1Q8ND07 529 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 GIPC2Q8TF65 315 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 ACBD3Q9H3P7 528 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms