RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 RIOX1Q9H6W3 641 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 LNPEPQ9UIQ6 1025 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.31■□□□□ 0.52
EXTL3-201ENST00000220562 VIL1P09327 827 aaKnown RBP18.31■□□□□ 0.52
EXTL3-201ENST00000220562 H2AFXP16104 143 aaPredicted RBP18.31■□□□□ 0.52
EXTL3-201ENST00000220562 VAC14Q08AM6 782 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 PLCL1Q15111 1095 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 DEFB107AQ8IZN7 70 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 INTS13Q9NVM9 706 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 SAC3D1A6NKF1 404 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 NBNO60934 754 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 GRIK4Q16099 956 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 METTL7BQ6UX53 244 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 RIPOR1Q6ZS17 1223 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 ILDR2Q71H61 639 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 TFAP2DQ7Z6R9 452 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 FAM120BQ96EK7 910 aaKnown RBP18.31■□□□□ 0.52
EXTL3-201ENST00000220562 SEMA4AQ9H3S1 761 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 UTP6Q9NYH9 597 aaKnown RBP18.31■□□□□ 0.52
EXTL3-201ENST00000220562 KLHL20Q9Y2M5 609 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 TSPAN3O60637 253 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 MAPTP10636 758 aaKnown RBP18.31■□□□□ 0.52
EXTL3-201ENST00000220562 MGAT1P26572 445 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 SLC26A2P50443 739 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 KCNMB4Q86W47 210 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 ANKRD49Q8WVL7 239 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 FIG4Q92562 907 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 PTPRHQ9HD43 1115 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 COMMD8Q9NX08 183 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 MAGEB16A2A368 324 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 ABCB1P08183 1280 aaPredicted RBP18.31■□□□□ 0.52
EXTL3-201ENST00000220562 PGAM1P18669 254 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 NUP107P57740 925 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 BFSP2Q13515 415 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 ADRM1Q16186 407 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 TBCELQ5QJ74 424 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 RBM43Q6ZSC3 357 aaKnown RBP18.31■□□□□ 0.52
EXTL3-201ENST00000220562 OPTNQ96CV9 577 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 NFKBIZQ9BYH8 718 aa18.31■□□□□ 0.52
EXTL3-201ENST00000220562 ATP6V1G2O95670 118 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 IFNA14P01570 189 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 ACAT1P24752 427 aaKnown RBP18.3■□□□□ 0.52
EXTL3-201ENST00000220562 ELK3P41970 407 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 KPNA1P52294 538 aaPredicted RBP18.3■□□□□ 0.52
EXTL3-201ENST00000220562 NR6A1Q15406 480 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 VN1R5Q7Z5H4 357 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 SH3GL1Q99961 368 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 OSGEPL1Q9H4B0 414 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 NCAM2O15394 837 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 DNAJB2P25686 324 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 SLC15A2Q16348 729 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 CCDC153Q494R4 210 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 ZNF438Q7Z4V0 828 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 ACTL9Q8TC94 416 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 SEMA4DQ92854 862 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 ADARB2Q9NS39 739 aaKnown RBP18.3■□□□□ 0.52
EXTL3-201ENST00000220562 CPA4Q9UI42 421 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 CEP170BQ9Y4F5 1589 aaPredicted RBP18.3■□□□□ 0.52
EXTL3-201ENST00000220562 PDZK1P1A8MUH7 402 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 DCDC2CA8MYV0 355 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 HSMCR30P0CW71 290 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 ERVK-10P10266 1014 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 CCR1P32246 355 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 DNERQ8NFT8 737 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 SERAC1Q96JX3 654 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 SYT15Q9BQS2 421 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 MYL4P12829 197 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 MSH3P20585 1137 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 RPL21P46778 160 aaKnown RBP18.3■□□□□ 0.52
EXTL3-201ENST00000220562 BNIPLQ7Z465 357 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 ATG16L2Q8NAA4 619 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 APBB2Q92870 758 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 SLC5A5Q92911 643 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 TMEM79Q9BSE2 394 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 PSMA3P25788 255 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 GCLCP48506 637 aaPredicted RBP18.3■□□□□ 0.52
EXTL3-201ENST00000220562 TERB1Q8NA31 727 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 DNAJB3Q8WWF6 145 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 VPS33AQ96AX1 596 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 CIPCQ9C0C6 399 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 DCLRE1BQ9H816 532 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 SATB2Q9UPW6 733 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 CD151P48509 253 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 SPANXN3Q5MJ09 141 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 NBPF12Q5TAG4 269 aaPredicted RBP18.3■□□□□ 0.52
EXTL3-201ENST00000220562 MIEF1Q9NQG6 463 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 STMN3Q9NZ72 180 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 L1RE1Q9UN81 338 aa18.3■□□□□ 0.52
EXTL3-201ENST00000220562 NRXN1Q9ULB1 1477 aa18.29■□□□□ 0.52
EXTL3-201ENST00000220562 MAP3K13O43283 966 aa18.29■□□□□ 0.52
EXTL3-201ENST00000220562 TCHHL1Q5QJ38 904 aaPredicted RBP18.29■□□□□ 0.52
EXTL3-201ENST00000220562 ZBTB49Q6ZSB9 765 aa18.29■□□□□ 0.52
EXTL3-201ENST00000220562 PDCD2LQ9BRP1 358 aa18.29■□□□□ 0.52
EXTL3-201ENST00000220562 C10orf88Q9H8K7 445 aa18.29■□□□□ 0.52
EXTL3-201ENST00000220562 ACTR8Q9H981 624 aa18.29■□□□□ 0.52
EXTL3-201ENST00000220562 DDX20Q9UHI6 824 aaKnown RBP18.29■□□□□ 0.52
EXTL3-201ENST00000220562 ATP9AO75110 1047 aa18.29■□□□□ 0.52
EXTL3-201ENST00000220562 FGFR2P21802 821 aa18.29■□□□□ 0.52
EXTL3-201ENST00000220562 ALDH9A1P49189 494 aa18.29■□□□□ 0.52
EXTL3-201ENST00000220562 MARC1Q5VT66 337 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms