RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 A0A0U1RQF3 1178 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 CDH16O75309 829 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 POMCP01189 267 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 CKBP12277 381 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 PDGFRAP16234 1089 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 SERPINB4P48594 390 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 NRLP54845 237 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 PTK7Q13308 1070 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 PTK6Q13882 451 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 GPNMBQ14956 572 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 ZRSR2Q15696 482 aaKnown RBP11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 PAN2Q504Q3 1202 aaKnown RBP11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 RNF43Q68DV7 783 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 CTU1Q7Z7A3 348 aaKnown RBP11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 RSPH3Q86UC2 560 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 SMC6Q96SB8 1091 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 ADAM2Q99965 735 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 RHOBTB2Q9BYZ6 727 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 TRABDQ9H4I3 376 aa11.71□□□□□ -0.54
GPATCH1-201ENST00000170564 GOLGA8MH3BSY2 632 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 GPR182O15218 404 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 DCTN3O75935 186 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 ENDOD1O94919 500 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 BAG2O95816 211 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 THP07101 528 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 FESP07332 822 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 CPA2P48052 419 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 NDUFV1P49821 464 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 HDAC4P56524 1084 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 WDR4P57081 412 aaKnown RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 SLC6A3Q01959 620 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 SPARCL1Q14515 664 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 CA9Q16790 459 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 KHDC1Q4VXA5 237 aaKnown RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 OTUD1Q5VV17 481 aaPredicted RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 IZUMO3Q5VZ72 239 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 ZNF598Q86UK7 904 aaKnown RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 TOP6BLQ8N6T0 577 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 RBM41Q96IZ5 413 aaKnown RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 SENP8Q96LD8 212 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 TSPAN18Q96SJ8 248 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 TMEM109Q9BVC6 243 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 STOML1Q9UBI4 398 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 PTPRDP23468 1912 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 A0A1W2PQ45 241 aaPredicted RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 A0A1W2PQY0 241 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 KLHL33A6NCF5 533 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 HUS1O60921 280 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 ZNF623O75123 536 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 KRT36O76013 467 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 GPD1P21695 349 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 SP100P23497 879 aaPredicted RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 GDF10P55107 478 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 PITX1P78337 314 aaPredicted RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 LAMB3Q13751 1172 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 TIGD5Q53EQ6 642 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 ZC3H12AQ5D1E8 599 aaKnown RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 SNX30Q5VWJ9 437 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 FYB2Q5VWT5 728 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 ANKLE1Q8NAG6 615 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 SLC43A3Q8NBI5 491 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 PCSK9Q8NBP7 692 aaKnown RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 ZNF296Q8WUU4 475 aaPredicted RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 CYTH2Q99418 400 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 C12orf65Q9H3J6 166 aaKnown RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 NMRK1Q9NWW6 199 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 PRKAG3Q9UGI9 489 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 CAPN9O14815 690 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 ATP5HO75947 161 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 SKIP12755 728 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 APLP1P51693 650 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 RPS6KA3P51812 740 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 DYNLT1P63172 113 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 PLCB3Q01970 1234 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 BST2Q10589 180 aaKnown RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 GPRIN1Q7Z2K8 1008 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 PDCD7Q8N8D1 485 aaKnown RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 RNF169Q8NCN4 708 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 ATL2Q8NHH9 583 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 PXYLP1Q8TE99 480 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 HASPINQ8TF76 798 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 SCG3Q8WXD2 468 aaKnown RBP11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 HSPH1Q92598 858 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 CNPY3Q9BT09 278 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 TMEM121Q9BTD3 319 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 GPATCH2LQ9NWQ4 482 aa11.7□□□□□ -0.54
GPATCH1-201ENST00000170564 RANBP2P49792 3224 aaKnown RBP11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 COL4A4P53420 1690 aaPredicted RBP11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 MYBPHLA2RUH7 354 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 LIN7AO14910 233 aaPredicted RBP11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 GYG2O15488 501 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 IFNB1P01574 187 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 LCP1P13796 627 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 ITIH2P19823 946 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 CETN2P41208 172 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 STILQ15468 1287 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 PKN2Q16513 984 aaKnown RBP11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 CLEC20AQ6ZU45 233 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 SLC35B2Q8TB61 432 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 RAET1EQ8TD07 263 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms