RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 XdhQ00519 1335 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 1700031M16RikA0A087WSH0 82 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Abhd12bG3UZN6 359 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 PtpaP58389 323 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Rps12P63323 132 aaKnown RBP12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Zc3h15Q3TIV5 426 aaKnown RBP12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Sel1l2Q3V172 688 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Myl6Q60605 151 aaKnown RBP12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Ddx3xQ62167 662 aaKnown RBP12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Rad9bQ6WBX7 403 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Zfyve28Q6ZPK7 905 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Gpr141Q7TQP0 305 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Zbtb46Q8BID6 600 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Mrto4Q9D0I8 239 aaKnown RBP12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 MsraQ9D6Y7 233 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Lamc1P02468 1607 aaKnown RBP12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Aox3G3X982 1335 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Vmn2r77L7N2B7 854 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Fgfr1P16092 822 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Klra1P20937 262 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Hnrnph2P70333 449 aaKnown RBP12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Nt5dc3Q3UHB1 546 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Mxd4Q60948 209 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Ppp2r1bQ7TNP2 601 aaKnown RBP12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Clip4Q8CI96 704 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 PdgfdQ925I7 370 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Plagl2Q925T4 496 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Tlcd1Q99JT6 247 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Dpy30Q99LT0 99 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Vta1Q9CR26 309 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Lrrc17Q9CXD9 443 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Rabl3Q9D4V7 236 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Ift46Q9DB07 301 aa12.1□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Xlr5bA2BI50 236 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Fam47eD3YWC7 402 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Vmn2r31L7N1Z4 861 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 IapP03975 557 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 PuraP42669 321 aaKnown RBP12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Tas2r125Q7M710 311 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Ppm1mQ8BU27 406 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Tm9sf1Q9DBU0 606 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Atp6v1c1Q9Z1G3 382 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Vmn2r100E9QAZ9 850 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Hes2O54792 157 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Rdh7O88451 316 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 PcnaP17918 261 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Nedd1P33215 660 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Usp4P35123 962 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Nat9Q3UG98 241 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Tcf4Q60722 670 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Otud6aQ6IE21 290 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Atp6v1hQ8BVE3 483 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Tmprss4Q8VCA5 435 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Acot13Q9CQR4 140 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Cdyl2Q9D5D8 503 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Nfu1Q9QZ23 255 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Tagln3Q9R1Q8 199 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Dip2aQ8BWT5 1523 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Slc6a21A0A1B0GSD2 748 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Grik3B1AS29 919 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Unc13dB2RUP2 1085 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 XntrpcF8VQM8 1264 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Psmc6P62334 389 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Olfr393Q8VGR6 312 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Oma1Q9D8H7 521 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Msh5Q9QUM7 833 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Trpc2Q9R244 1172 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Pex5O09012 639 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Lmnb1P14733 588 aaKnown RBP12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Rab17P35292 214 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Sar1aP36536 198 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 SykP48025 629 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Vsx2Q61412 361 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Cyp3a11Q64459 504 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Atg16l2Q6KAU8 623 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Maml1Q6T264 1020 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Gper1Q8BMP4 375 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Tcaf1Q8BNE1 924 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 PolbQ8K409 335 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 FktnQ8R507 461 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Pcdhgc5Q91XW9 944 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Limd1Q9QXD8 668 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Tmem59Q9QY73 323 aa12.09□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Ccng1P51945 294 aa12.08□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Ptcd3Q14C51 685 aaKnown RBP12.08□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Gm5431Q5NCB3 844 aa12.08□□□□□ -0.47
Scn8a-208ENSMUST00000200963 HpseQ6YGZ1 535 aa12.08□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Rps6ka6Q7TPS0 764 aa12.08□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Rnf8Q8VC56 488 aa12.08□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Pde2aQ922S4 916 aa12.08□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Tdrd1Q99MV1 1172 aa12.08□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Tbx20Q9ES03 445 aa12.08□□□□□ -0.47
Scn8a-208ENSMUST00000200963 PlekQ9JHK5 350 aaKnown RBP12.08□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Fbxo16Q9QZM9 334 aa12.08□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Cd97Q9Z0M6 818 aa12.08□□□□□ -0.47
Scn8a-208ENSMUST00000200963 Lipo2D3YY49 398 aa12.08□□□□□ -0.48
Scn8a-208ENSMUST00000200963 Fkbp8O35465 402 aa12.08□□□□□ -0.48
Scn8a-208ENSMUST00000200963 Kctd19Q562E2 927 aa12.08□□□□□ -0.48
Scn8a-208ENSMUST00000200963 Dnajc1Q61712 552 aaKnown RBP12.08□□□□□ -0.48
Scn8a-208ENSMUST00000200963 Dsg1bQ7TSF1 1060 aa12.08□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms